Pseudomonas syringae pv. tomato NYS-T1, NB04_RS10740

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. tomato strain NYS-T1 Contig6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGCCGTTCCAGATTTCCGGCCAGCCAAAAATCGTCAACGCCGCGCCGGAGAGCCTGCCACGGGCGGTTTTCACCAGGTCGAACTGCCCCGAACCGTCCT TGTCGGCCTCGTTGCCCTCACTGCCGAATTTCATCGGCACGGTGATGTGGCTGTCGAAGGAAATGATCCGCTCTTGCAGGTCGTCGGCCTGCTTCATGAC CTTGACCGGGTAACTGGCGGGCAAGCCGTAATTCCAGGCCAGAAAACCCGCGCCTGCACTAATGGCCAGAGCCAGCGGCAGGCCGATGAAGAGAGCCTTT TTCCAACGCGGTCTTGTCATTTCCGTCTCGTTTGATTAACCGGGGCGCGGCCTGCAAGGGCCGTTGCTATCTGGTGGAGAACGAGCGGATGGGCGAAAAA TTTAGCGCAACGTGCTGTGTGCAGGCGTTGAGCTAAATTTGTCAGCCGGTTTTACGTTCTAGCTTGGATAACGGCGGTCTCGGGTTGGAACAGGTAGGCA
DNA Sequence for Gene
>NB04_RS10740
ATGACGATTTCTCGACGAGGGTTCATGGCAGGGCTGGCGCTGACCGGCGCGGCGCTTCCGGCTGCTTATTACGCGCACCGCGAACTCACCCGCGTCGAGG AACCCGTGACGCCGGGCGAGGCCACGGCCGGGCCTGCGGACACCGCCACTCAGCATCTGGCCGACAAACTGCGTGGCGTGTGGACCCTGCGTTTCGAGGG TCGTGATGCCGGACTGAGCGGAGCTCCGCTGCAAGGCCTGGAAATGTTTCTCGACATTGCCCCGCGTGGGCGCGGCCTGCGCGGCTATATCGACACGGCC GAGCAGTTGCGCGGCGAGGGCATGCCGCGCTTCCGGGTGATCGGCGACCTGCAACCGGCCAATGCCGGGAAACTGTATCTGCGGGTCATGGACGGCCATG CGGGCAATGATCCGCACAGCGACACCCCGGATTACGAATTCAGCCTGACCCTCGATGAAGTCTGGGGCGCGTTCGGCAATGCCGGCAGCGGCACGCTCAG CGGGCGTGTCGAGCGACTGGATCGGCCATTGGCCCTGCCGGAGCTGGAAAACCGCCTGATCGCCATCAAACAGGTTTTCCCCGAAGCGCGTGAGCGGGTG GGGTTGAGTCCGCCGTTTCTGGCCTGGCTGGTTTCCAGGGAGCATCGTCTGTTTCACCAGCTCTGGCATGCGTCTCGGGACAAATGGCACAAGCTGCCCG AAGACAAACGCGATGCCCTGCGCGGCATCGGTTGGCAGCCGGGGCCGCGCGAAAAAGAGCGTGATGCCCGTGGCCCGCGCAAGGACCGTAATGGGTCGGG TGAAGACTTTTTCTACATGCACCGGCACATGCTGATTCAGGCGCGCAAGATTCAAGACCTGCCGTCGTGGCCGCGCTTTCCGTTGCCGCAACCGGAGCTG GAGCGTGACCGGCTGGGCTTTGCCCGCTACTTCGACAATCACGACGGCTGCGCCTTGCCGCCCAACTGGCTGGCGCAGGGTGATGAGGAGTACACGCAGC TGGTCAGCGACATCAAAAGCCACGAGACGTACCACACGCATTTTGAGGTGTGGGAATCGCATTACCGCGATCCGCGTTTTCTGTCGAAGCTGACGTTGGG GCAGTTCGGTTCGCAGGTCGAGCTGGAGCTGCACGACTGGCTGCACATGCGCTGGGCCTCGGTGGCGCGCGACCCGGCCAATGGCCAGCCGGTGCCGATG GCACGCCGCTCGGATGACTTCGCCGAGCGCTGGTTCGAGCCGGAAAACGACTTTCTCGCCGACCCGTTCTCGTCCCATGTGAACCCGGTGTTCTGGATGT TCCACGGCTGGATCGACGACCGCATCGACGACTGGTTCCGCGCCCATGAGCGCTTTCATCCGGGCGAAGTGAAACGCCTGGACGTCAACGGCGTGCCATG GTTCGCTCCGGGCCGCTGGGTTGAAGTCAGCGACCCGTGGCTGGGACCGGAAACCCACGGTTGCAGCACCGTGCCGGGGCAGACGGCGGGCACGACCATG GAAATGGACCCGGAAGTGATGAAGCTTGCGCTGCGCATTACCTTTGCGGCGGATGACAAATTGAGCAACCTGCTGCGCCGCGTACCGCGCAGACCTTGGT ATGCAAGGAATCTGTTGCCGGAGAGGTGGTTTTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGAGCGGCATGCCGACGCGGAGCGTCGCACGATAGTTGAGATTATCGTTCCGCATGCTCCAGCGTGGGAATACAGTTCTCGACGCTCTGCGTCGCAAGGG GGCGCGGAGCGTCCGGAACGGCATGCCGACGCGGAACGTCGCACGATAGTTGAGATTATCGTTCCGCACGCTCCAGCGTGGGAATGCAGTTCTCGACGCT CTGCGTCGCACGATAGTGGATCGTGCGCTCAGCGCACCTGCCAACCCCCACCCAGTGCCTTGTACAGCGCAATGCTTGCCTGCACCCTTGCCAGCCGCAA CTGCACACTTACATCCTGCGCCAAGTACAGCGTGCGTTGGGTTTCCAGTACGGTCAGCAAGTCCTCGGCGCCGGCTTCGTAGCGGCTCTGGGCAATGCGG AAGGCGGTTTGCGCCTGTTTAAGTTCCTCTTCGTGCCAGTAGCGTTGCTGGTCGAGGCCGCTGATGCTGTTCAGGGCTTTTTCGACGTCGGCGAAGCTGT
Amino Acid Sequence
>Tat (twin-arginine translocation) pathway signal sequence domain protein
MTISRRGFMAGLALTGAALPAAYYAHRELTRVEEPVTPGEATAGPADTATQHLADKLRGVWTLRFEGRDAGLSGAPLQGLEMFLDIAPRGRGLRGYIDTA EQLRGEGMPRFRVIGDLQPANAGKLYLRVMDGHAGNDPHSDTPDYEFSLTLDEVWGAFGNAGSGTLSGRVERLDRPLALPELENRLIAIKQVFPEARERV GLSPPFLAWLVSREHRLFHQLWHASRDKWHKLPEDKRDALRGIGWQPGPREKERDARGPRKDRNGSGEDFFYMHRHMLIQARKIQDLPSWPRFPLPQPEL ERDRLGFARYFDNHDGCALPPNWLAQGDEEYTQLVSDIKSHETYHTHFEVWESHYRDPRFLSKLTLGQFGSQVELELHDWLHMRWASVARDPANGQPVPM ARRSDDFAERWFEPENDFLADPFSSHVNPVFWMFHGWIDDRIDDWFRAHERFHPGEVKRLDVNGVPWFAPGRWVEVSDPWLGPETHGCSTVPGQTAGTTM EMDPEVMKLALRITFAADDKLSNLLRRVPRRPWYARNLLPERWF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site