Pseudomonas syringae pv. tomato NYS-T1, NB04_RS10170

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. tomato strain NYS-T1 Contig6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTGCTTTTGGTGCCCACCAGCAACCAGTCGCAGGGCGGCATGTCGGTGGCAGAGCGGTAGGCCTGTACAGGCTGAAGGTGTAAATCACCGTGTACGGCGC TTTTGACCTGCAAACCTTGGTGCGCCACGGTCTCAAACTCGCTGCGCAGCAGAAAATGCACGTCGAAACCGGCCCGCGCCAGCATCAGTCCGTAAAAACC GCCGATGGCACCGGTACCGATGATGCCGATACGCGGCCGATGGGGCTCAGTGGTCATAAAAACTCCCTTGGCTGTCCGGGTATTCAAGGCCACACACTAT CCGTGGCGGCGGTTTGTCTTGCAATACAGAGGCGCAACTCGGCCGGCAACCACGTCGAACCTGCCCGATACCTCGTTTACTTATTGTCGAACAGCGCGAT AACGCGCTAAGGTTCCGCTCCCCGCTGCGCTCAAACCTGCTGGGCACCGCCGCACGGGGGACCGTTGGCGGCCAGTACCCGCGACCTGATGAGTAACACG
DNA Sequence for Gene
>NB04_RS10170
ATGGCTGATTTACCGATTAACGACCTCAACGTTGCCTCCAACGAGACTCTGATCACACCGGATCAGCTCAAGCGCGACATCCCGCTGACCGACGCTGCAC TGCAGACTGTCAGCCAGGGTCGCGAAGTGATTCGCAACATTCTCGATGGCAATGATCACCGCCTGTTCATCGTGATCGGCCCGTGCTCGATCCACGACCT GAAAGCGGCCAAAGAGTACGCCGAGCGCCTCAAGGTACTGGCGGCGGAAGTTTCCGACACGCTGTATCTGGTCATGCGCGTGTACTTCGAGAAGCCTCGC ACCACAGTGGGCTGGAAAGGCCTGATCAACGACCCGTACCTGGATGACTCGTTCAAGATCCAGGATGGCTTGCACATCGGCCGCCAACTGCTGCTGGACC TGGCTGAAATGGGCCTGCCGACCGCAACCGAAGCGCTGGACCCGATCTCCCCGCAATACCTGCAGGACCTGATCAGTTGGTCGGCCATCGGCGCGCGCAC CACCGAATCGCAGACCCACCGCGAGATGGCTTCCGGCCTGTCTTCGGCCGTCGGCTTCAAGAACGGCACCGACGGCGGCCTGACCGTTGCCATCAACGCT CTGCAGTCGGTCTCAAGCCCGCATCGCTTCCTGGGCATCAACCAGGAAGGCGGCGTGTCGATCGTGACCACCAAGGGCAACGCCTATGGCCACGTCGTGC TGCGCGGTGGGAATGGCAAGCCCAACTATGATTCGGTCAGCGTCGCGCTCTGCGAGCAGGCGCTGAACAAGGCCGGCATTCGCCCCAACATCATGGTCGA TTGCAGCCACGCCAACTCCAACAAGGACCCGGCCCTGCAACCGCTGGTGATGGAAAACGTCGCCAACCAGATTCTGGAAGGCAACGAGTCGATCATCGGC CTGATGGTCGAGAGCCATCTGAACTGGGGTTGTCAGGCGATTCCCAAGGATCTGTCGGAATTGCAGTACGGCGTCTCCATCACCGATGCCTGCATCGACT GGGAAAGCACTGAAAAAACCCTGCGCAGCATGCATGCCAAGCTCAAGGGCGTACTGCCGGCGCGCACGCGTAAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGGTATCTAGTCGATCTAATGCAGTAACGAAAACGCCGAGCAGATGCTCGGCGTTTTTCTGGGTGCCAGCAGCAGAAAAGCCGGATCAGAGCTTGGCCG CTTGCGACTGCAGGTCATGAAGTTCCATGTAGCGCTCGACATAAGAACAGGACGGTATGACCGAATAGCCAATGCTGTCGGCGTAGTCCAGTGCCTGTTT GGTGAGGGCAGCGGCAATACCGCGACCACGCAAGGCGTCGGGAACAAAGGTGCGGTAAAAATCCAGGGTTTGTTTACCGAGATCCATATACGTCAGATAG GCACGGTGGCCGTCGATAATGATTTCAAAATGATGGCCGGTCTCGTCATGGTGGATGGACAACGCCTCGCTCATCGCTACTCCTCGCGGGTCTTGGAATT TGACCCCTACCTTACCGATCTTTTTCCGGCGAAGGAACATCTACGCCACCCAGTGCCTGTTTTTGACACCGGAAAGAGCATTGCCGATCTCGACAAACAG
Amino Acid Sequence
>phospho-2-dehydro-3-deoxyheptonate aldolase
MADLPINDLNVASNETLITPDQLKRDIPLTDAALQTVSQGREVIRNILDGNDHRLFIVIGPCSIHDLKAAKEYAERLKVLAAEVSDTLYLVMRVYFEKPR TTVGWKGLINDPYLDDSFKIQDGLHIGRQLLLDLAEMGLPTATEALDPISPQYLQDLISWSAIGARTTESQTHREMASGLSSAVGFKNGTDGGLTVAINA LQSVSSPHRFLGINQEGGVSIVTTKGNAYGHVVLRGGNGKPNYDSVSVALCEQALNKAGIRPNIMVDCSHANSNKDPALQPLVMENVANQILEGNESIIG LMVESHLNWGCQAIPKDLSELQYGVSITDACIDWESTEKTLRSMHAKLKGVLPARTRK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site