Pseudomonas syringae pv. tomato NYS-T1, NB04_RS03755 (tpx)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. tomato strain NYS-T1 Contig2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGTACCTGCAACAGCACGGTACGCCGCTGCAACTGGAGGATCTTGCGCACCATCAGGTCATCGAATATTTTTCGGCCAGTACCAGCAAACGCTATGGTCT GGAGTTTGTGGGTGAAGGCGGGGCGCCTGATCACGTCCTGGCCTGTTCGATCTCGGTCAACAGCGCCGATGGCTATGTGGCTGCCTGCGAGGCCGGCTTC GGCCTGATACAAGTGCCGCGCTACCACATTGCCGGGCAATTGCGCAGCGGCACGCTGGTCGAGGTGCTGCGCAGGCACCGCCCACCGCCGTTGGCGCTGA CGGCGCTTTATCCGCCGCACAGGCAGTTGTCACGACGGGTCAGGGTGTTCGTCGATTGGCTGGTGGAATTGTGTGACCACCCGGATATCCGGGACAGACT GGTTTCCTGAACAAATTCGGAATTATCCGATATAGGCCGCGGCACGCTTTCGTGGTTAACTTCCGGCTCTTTATATTCATTTCAAGAAGGAACGTGTTTC
DNA Sequence for Gene
>NB04_RS03755 |tpx
ATGGCTCAAGTGACCCTTAAAGGCGGCCCCGTTCAAGTCAATGGCACCCTGCCTGAAGTCGGCAGCAAGGCAGCAGCCTTCACGCTGGTGGGCGAAGGTC TTGCTGACAAGACCCTGGCTGACTTCGCTGGCAAGCGCAAGGTGCTGAACATCTTCCCGAGCGTCGATACTCCGACCTGCGCAACATCGGTACGTAAGTT CAATGCCCAGGCCAACGAGCTGAACAACGCCGTTGTGCTGTGCATCTCCGCCGACCTGCCGTTCGCCCAGGCACGCTTCTGCGGCTCCGAAGGTCTGGAA AACGTCAAGAACCTGTCTTCGTTCCGCAGTGCTGATTTCAGCGAGCATTACGGCGTTGCCATTGCCGACGGTCCGTTGAAGGGCCTGACCGCTCGCGCAG TGGTTGTGCTGGACGAAAACGACACTGTGCTGCACAGCGAACTGGTATCGGAAATTGCCGAAGAGCCAAATTACGACGCTGCACTGGCTGTACTGAAGTA A
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGTTCTGCACTACTTCGACGGTCTGAATCTGTTCAGGCCGTTTTTTATTTGTGCTTCATACGGTTATCGAAAGTAAGCGCTTGGTAAAGGCGCTTTGCTT GTCACACATCTGTGCTTATTGTTCAGCCTTCTTAATGAAGCCCCACCTGTAATGGTTGATTTATTCATGCAATCGTCTGGCTCCCGTAAATCCCGTCGCT GGTTGATCAGTGTGTTGATCCTGTTGGTCATTGTCGCCCTGTGTTGGTGGTTATGGCCTGCGTCCACGCTCGACAAAGGGGCCGAGAGCAAGCGGGCGGG CGCCAGTGGCATGGGCCGGCCGGGCTTTGGTGCGTCGGCTATCGCCGTTCCGGTGCGTGTTGCCCCGGCCACAGAAGGCGAATTTCCTATTTTTTACAAG GCGCTCGGCACGGTCACGGCGACCAATACCATCAATGTGCGCAGCCGGGTGGCGGGTGAGCTGGTCAAGCTTTACTTCCAGGAAGGGCAGAAGGTCAAGG
Amino Acid Sequence
>lipid hydroperoxide peroxidase
MAQVTLKGGPVQVNGTLPEVGSKAAAFTLVGEGLADKTLADFAGKRKVLNIFPSVDTPTCATSVRKFNAQANELNNAVVLCISADLPFAQARFCGSEGLE NVKNLSSFRSADFSEHYGVAIADGPLKGLTARAVVVLDENDTVLHSELVSEIAEEPNYDAALAVLK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site