Pseudomonas syringae pv. tomato NYS-T1, NB04_RS01845
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. tomato strain NYS-T1 Contig1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCAGCTTGAGCTGGCGGAACAAGCCAAGGCTGACGGCGCGACCTACGTGGCGTTTGGCAGGTTCTTCAATTCGCAGACCAAGCCCGGCGCACCGGCCGTG CCGCTGGACCTGATCGCCCAGGTCCGCGCCAGGGTTCATTTGCCGATTGCGGTGATCGGCGGCATCACCCTGGAAAACGCCCCGCAACTGGTCGAGCACG GCGCTGACCTGCTGGCCGTGGTGCATGGCCTGTTCGGCGCCGAAACCCCGCAGGAAGTGACCCGCCGGGCGAAAGCGTTTATGGCGTTGTTGTAGAGCGC AATCGCTGCCACAAAACTCGTGTCCCCATGCTCGGAGCATTGGCATGATAGTCATATGTGCGCGCTTCATTTGATATAGTGCGCGTTCCTGCGCCTGCTC TGGCTCATGCCACTCAATAAAGCAGCCCGGTATAAAGCTGCCCGCCTCGGCTGACCCCAGCGTAGACACGAATTCCCCGTTTCAAAGCAGAGACCCGATC
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| DNA Sequence for Gene |
>NB04_RS01845
ATGTCCCGTTCCGAAACACTGTTCGCCAATGCCCAAAAACACATTCCCGGTGGCGTCAATTCGCCAGTTCGCGCGTTCAAGAGCGTGGGGGGGACGCCGC TGTTCTTCAAGCATGCTGCTGGCGCTTACGTGACTGACGAAGACGACAAACGCTACGTTGACTACGTCGGCTCCTGGGGCCCGATGATTTTGGGCCATAG CCACCCGGACGTGCTCGACGCCGTGCGCAATCAGCTGGAACACGGCCTGTCTTACGGTGCGCCGACCGCGATGGAAACCGAGATGGCCGATCTGGTCTGC GAGCTGGTGCCGTCCATGGAAATGGTGCGCATGGTCAGCTCGGGCACCGAAGCGACCATGAGCGCGATTCGTCTGGCCCGTGGCTTCACCGGCCGCGATA GCATCATCAAGTTCGAAGGCTGCTACCACGGCCACTCCGACAGCCTGCTGGTCAAGGCCGGCTCCGGCGCACTGACGCTGGGCGTGCCAAGCTCGCCGGG CGTACCAGCGGCCTTCGCCAAACATACCCTGACCGTACCCTTCAACGACCTGAACGCCGTGCGCGACCTGCTGGCCGAAGTGGGCCAGGAAGTGGCGTGC ATCATCGTCGAGCCCGTTGCAGGCAACATGAACTGCGTACCGCCCGCGCCGGGCTATCTGCAAGGGCTGCGCGCCCTGTGCGACGAGCATGGCGTGGTGC TGATTTTCGACGAAGTGATGACCGGTTTTCGTGTGGCCCTCGGTGGTGCACAGGCTTACTACGATGTGAAGCCTGATCTGAGCACGTTCGGCAAGATCAT CGGCGGCGGCATGCCGGTGGGCTGCTTTGGCGGCAAACGCGAAATAATGTCGCACATCGCGCCGCTCGGCCCGGTCTATCAAGCCGGCACCCTGTCGGGC AATCCTCTGGCGATGGCCGCTGGCCTGACCACTTTGCGCCTGATCAGCCGCCCAGGCTTTCACGATGAGCTGAGTGACTACACTCGCCGCCTGCTCGAAG GCCTGCAACAAAGGGCTGACGCCGCGGGCATCGCGTTCGTGACGACTCAGGCAGGCGGCATGTTCGGCCTGTACTTCAGCGATGCAAGCGAAATTGTTAC GTTTGAAGACGTGATGACCAGCGATGCCGAGCGCTTCAAGCGCTTCTTCCACCTGATGCTGGAAGGTGGCGTCTACCTTGCGCCAAGTGCCTTTGAAGCC GGTTTCACCTCTATTGCCCACGGCGATGCCGAGTTGAAACTGACACTTGATGCCGCAGAAAAGGCGTTCGCTGCGCTCAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCACGCCAGACACACTTGCGCGGGGTGTCATTGAACCGGCGCAAGTGAAGTCTGTGAATGAAACGGAACGTTAAGTGCGTATTTTGCTTCTACAATGCAG TGCGAACGCTGCAAATACACGGCACTGGAAGTTTGGTATCAGGCAATACACCCGTAAAAACGGGGTTTTCCTCGCCGTGCAGCAGAAAATCCGTAAAGAC TTTGTAAGGTTGGCTCTGCTTATTTCATAATGCGCAGCCAGCACGTTTAGCTGGTCGGGCATGCCCGCACCTTTTTCAGAGGTAAGTCGACTCCCATGAA CCGCACCGGCCGCACCCTTGTATTGGGCTGCCTGTTGCTTGTCTATCCCCTGCTGGCGACTGCCGGCGGCAACTCGTTGTTAATCCCGGCGATGGGTCGT TGCACCCTCAATACCCAGCCAGAGAACCTGCCTGCTGCGCTCGCAGCCTGTCAGCAGGCCGCTCAGGGCGGGGATGCTCAGGCGCAATACGAGTTGGGTG
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| Amino Acid Sequence |
>glutamate-1-semialdehyde 2,1-aminomutase
MSRSETLFANAQKHIPGGVNSPVRAFKSVGGTPLFFKHAAGAYVTDEDDKRYVDYVGSWGPMILGHSHPDVLDAVRNQLEHGLSYGAPTAMETEMADLVC ELVPSMEMVRMVSSGTEATMSAIRLARGFTGRDSIIKFEGCYHGHSDSLLVKAGSGALTLGVPSSPGVPAAFAKHTLTVPFNDLNAVRDLLAEVGQEVAC IIVEPVAGNMNCVPPAPGYLQGLRALCDEHGVVLIFDEVMTGFRVALGGAQAYYDVKPDLSTFGKIIGGGMPVGCFGGKREIMSHIAPLGPVYQAGTLSG NPLAMAAGLTTLRLISRPGFHDELSDYTRRLLEGLQQRADAAGIAFVTTQAGGMFGLYFSDASEIVTFEDVMTSDAERFKRFFHLMLEGGVYLAPSAFEA GFTSIAHGDAELKLTLDAAEKAFAALK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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