Pseudomonas syringae pv. tomato NYS-T1, NB04_RS01025 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. tomato strain NYS-T1 Contig1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCTGGAAACCGAAGTGCCAGTATTCGGCATTTGCCTTGGTCACCAGTTGCTGGCGCTGGCTGCGGGTGCCAAGACCGTGAAAATGGGCCATGGCCACCA CGGTGCAAACCACCCGGTTCAGGATCTGGACACCGGCGTTGTGATGATCACCAGTCAGAACCACGGTTTTGCGGTTGATGAATCGACGTTGCCGGGCAAC GTTCGCGCTATCCACAAGTCGCTGTTCGACGGCACCCTGCAGGGTATCGAGTTGACTGACAAGAGCGCGTTCAGCTTCCAGGGTCACCCTGAAGCAAGCC CAGGCCCGAACGATGTAGCGCCCCTGTTTGACCGCTTTATCGACGCCATGGCCAAGCGACGCTGACCGGTTGCCTTGAGACTGTAAACGCAGGTGCCCAG GGCGGCCCCGGACCACACGTCCGGTTGCTGCCGCCCAGGCCACCTCAGAAAAATGTTCAAGACGGCTTGCCGACTGACCTGCGGATTTGAGTGACAACCC
DNA Sequence for Gene
>NB04_RS01025 |carB
ATGCCAAAACGTACAGATATTAAAAGCATCCTGATTCTCGGCGCCGGCCCCATCGTGATCGGCCAGGCCTGTGAATTCGACTACTCCGGCGCCCAGGCTT GCAAAGCCCTGCGCGAAGAGGGCTATCGCGTCATCCTGGTGAACTCCAACCCGGCGACCATCATGACCGACCCGGCCATGGCCGACGCCACCTACATCGA GCCGATCAAATGGCAGACCGTTGCCAAGATCATCGAGAAAGAGCGCCCGGACGCGTTGCTGCCAACCATGGGCGGCCAGACCGCACTGAACTGCGCACTG GATCTGGAGCGTGAAGGCGTTCTGGAGAAGTTCGGCGTCGAGATGATCGGTGCCAACGCCGACACCATCGACAAGGCTGAAGACCGTTCGCGTTTCGACA AGGCCATGAAGTCCATCGGCCTGGCGTGCCCGCGTTCCGGCATCGCGCACAGCATGGAAGAAGCCAACGCGGTTCTTGAAAAGCTCGGTTTCCCTTGCAT CATCCGTCCGTCGTTCACCATGGGTGGCACGGGCGGCGGTATTGCTTACAATCGTGAAGAGTTCGAAGAAATCTGCGCTCGTGGTCTGGACCTGTCTCCG ACCAAGGAACTGCTGATCGACGAATCGCTGATCGGCTGGAAAGAGTACGAAATGGAAGTTGTCCGCGACAAAAAGGACAACTGCATCATCGTCTGCTCCA TCGAAAACTTCGATCCGATGGGTGTGCACACCGGTGACTCCATCACCGTTGCCCCGGCACAGACCCTGACCGACAAGGAATATCAGATCCTGCGTAACGC CTCGCTGGCGGTACTGCGCGAGATTGGCGTTGAAACGGGTGGTTCCAACGTTCAGTTCGGCATCTGCCCGGACACCGGCCGTATGGTCGTCATCGAGATG AACCCGCGCGTGTCGCGTTCCTCGGCGCTGGCTTCCAAGGCGACCGGCTTCCCGATTGCCCGGGTTGCGGCCAAGCTTGCAGTGGGTTACACCCTCGACG AGCTGTCCAACGAAATCACCGGCGGCAAGACCCCGGCGTCCTTCGAGCCATCCATCGACTACGTCGTTACCAAGCTGCCGCGCTTCGCGTTCGAGAAGTT CGCCAAGGCCGATGCACGCCTGACCACGCAGATGAAGTCGGTGGGTGAAGTCATGGCCATCGGCCGTACTTTCCAGGAATCCCTGCAGAAAGCGCTGCGC GGCCTGGAAGTTGGTGTGTGTGGCCTTGATCCGAAGCTGGACCTCAGCCATCCGGAAAGCATGAGCACGCTCAAGCGCGAGCTGACCGTGCCGGGCGCCG AGCGTATCTGGTACGTCGCCGATGCGTTCCGCGCAGGCATGACTGTCGAAGAAATCTTCGCCATGAACATGATCGACCCCTGGTTTCTGGTCCAGATCGA AGATCTGGTCAAGGACGAGGAGAAGATCAAGACGCTTGGCCTGTCGGCAATTGATCGCGACCTGATGTACCGTCTCAAGCGCAAGGGCTTCTCCGATGCA CGCCTGGCCAAACTGGTCGGCGTTACCGAGAAAAACCTGCGCACGCACCGTCACAAGCTGGATGTGTTCCCGGTCTACAAGCGCGTCGATACCTGCGCGG CCGAGTTTGCAACCGACACCGCGTACCTTTACTCGACGTACGAAGAAGAGTGCGAAGCCAACCCTTCGACGCGCGACAAGATCATGATCCTCGGCGGTGG CCCTAACCGTATCGGCCAGGGTATCGAGTTCGACTACTGCTGCGTGCACGCAGCCCTGGCGCTGCGTGAAGACGGGTACGAGACCATCATGGTCAACTGC AACCCGGAAACCGTCTCCACCGACTACGACACCTCTGATCGTCTGTACTTCGAGCCGGTCACCCTGGAAGACGTACTGGAAATCGTACGCGTCGAGAAGC CCAAGGGCGTGATCGTGCAGTACGGCGGCCAGACCCCGCTGAAACTCGCCCGTGCCCTGGAAGCCGCCGGCGTGCCGATCATCGGCACCAGCCCGGACGC CATCGACCGCGCAGAAGACCGCGAGCGCTTCCAGCAGATGGTCGAGCGTCTCAACCTGCGTCAGCCGCCAAACGCCACCGTGCGCAGCGAAGACGAAGCG ATTCGTGCCGCCGCGAAAATCGGTTACCCGCTGGTCGTGCGTCCGTCCTATGTACTGGGCGGCCGGGCGATGGAAATCGTTTACCAGGAAGACGAGCTCA AGCGTTACCTGCGTGAAGCGGTTCAGGTGTCCAACGACAGCCCGGTGCTGCTCGACCACTTCCTGAACTGCGCCATCGAAATGGACGTCGATGCAGTTTG CGACGGTACTGACGTGGTGATCGGCGCGATCATGCAGCACATCGAACAGGCGGGCGTTCACTCCGGCGACTCCGCCTGCTCGCTGCCGCCGTACTCGCTG CCTGCTCACATCCAGGACGAGATGCGCGAACAGGTCAAGAAGATGGCCCTGGAACTGGGCGTGGTGGGCCTGATGAACGTACAGCTGGCACTTCAGGGCG AAGACATCTACGTGATCGAAGTGAACCCGCGTGCATCGCGTACCGTGCCGTTCGTTTCCAAGTGCATCGGTGTTTCCCTGGCCATGATCGCTGCGCGCGT GATGGCGGGTAAAACCCTGAAAGAGCTGAATTTCACCAAGGAAATCATTCCTAATTTCTATAGTGTGAAAGAGGCCGTGTTCCCGTTCGCCAAATTCCCT GGCGTTGACCCGATCCTTGGCCCGGAAATGAAGTCGACAGGCGAAGTGATGGGCGTGGGCGACACCTTCGGTGAAGCGTTCGCCAAGGCTCAGATGGGCG CCAGCGAAGTGCTGCCGACCGGCGGTACTGCGTTTATCAGCGTACGTGATGACGACAAGCCGCTGGTTGAAGCGGTTGCTCGTGACCTGATCAACCTGGG TTTCGAAATTGTCGCAACAGCCGGAACGGCCAAGCTGATCGAAGCGGCCGGCCTGAAAGTGCGTCGCGTCAACAAGGTGACCGAAGGTCGCCCGCACGTG GTCGACATGATCAAGAATGACGAAGTCACCCTGATCATCAACACCACCGAAGGCCGTCAGTCTATCGCTGATTCCTACTCCATCCGTCGCAACGCCTTGC AGCACAAGATTTACTGCACCACTACCATTGCAGCAGGCGAAGCGATCTGCGAAGCGCTCAAGTTCGGTCCAGAGAAGACCGTGCGTCGCTTGCAGGACCT CCATGCAGGATTGAAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCAAATACCCGATGACCGTTCAGGGCGCTCGCGCCCTGGAAGAAGAGCTGACTCACCTGACCAAGGTGATCCGTCCCAAATTGAGCCAGGACATTGGTAC TGCGCGCGAGCTGGGCGACCTCAAGGAAAACGCTGAATACCATGCTGCCCGCGAGCAGCAGGGTATGGTTGAAGCGCGTATTCGTGATATCGAAGGCCGT ATGCAGAACGCGGTGGTGATCGACGTTACGACTATTGCGCACACTGGCAAGGTGATTTTCGGCACGACAGTCGAAATCGCCAACGTCGAGACCGACGAAA GCGTTGTTTACCAGATCGTGGGTGAGGACGAGGCGGATATCAAGAAGGGCAAGATTTCAGTGGGTTCGCCCATTGCTCGCGCCTTGATTGCCAAGGAAGA AGGTGACGTCGTCGTGGTGAAAACGCCGAGTGGCGTTATCGAATACGAAATCATCGAAGTGCGTCATATCTGATGCAAGTGCCCGCCATGGCGGGCACTT
Amino Acid Sequence
>carbamoyl-phosphate synthase large chain
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCAL DLEREGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLGFPCIIRPSFTMGGTGGGIAYNREEFEEICARGLDLSP TKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEM NPRVSRSSALASKATGFPIARVAAKLAVGYTLDELSNEITGGKTPASFEPSIDYVVTKLPRFAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALR GLEVGVCGLDPKLDLSHPESMSTLKRELTVPGAERIWYVADAFRAGMTVEEIFAMNMIDPWFLVQIEDLVKDEEKIKTLGLSAIDRDLMYRLKRKGFSDA RLAKLVGVTEKNLRTHRHKLDVFPVYKRVDTCAAEFATDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLARALEAAGVPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEA IRAAAKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVDAVCDGTDVVIGAIMQHIEQAGVHSGDSACSLPPYSL PAHIQDEMREQVKKMALELGVVGLMNVQLALQGEDIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEIIPNFYSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPLVEAVARDLINLGFEIVATAGTAKLIEAAGLKVRRVNKVTEGRPHV VDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site