Pseudomonas syringae pv. syringae B301D, PSYRB_RS22140
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B301D, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AAACGCTTCAGGACAAGCCGCTGGGCTGTTTCTCCAGGTGGGAGCCTTCGCCAACCCGGACGCTGCGGAACTCCTGAGGTCGAAATTGAGCGGGATGGTT CGAGCGCCGGTGTTCGTCAGCTCGATAGCGCGCAATCAGCAAACACTCTATCGAGTGCGGATGGGACCGATCGACACGCAGGGTGAAGCCCAGCAGCTGC AAAACAGCGTCAGGTCGGCCAATCTGGGTCAGCCGAGCGTAGTGACATCGGATCAGTAAGTTCTTCGACAATCGTTCCCCGGCAATAATGGGGGACGATA TGCAGTCGCACGCGGCGCAGATTTGCTTTCAGGGCAAGCGTTGCAGGTAACTGCCCACAAGGTCGTGTGTCGAACAGGCGACTTTGTCAGCCAGGGTTAC AGCCTGGCGCCACGAGCCGTACCGAAGCGTTTTCGCTTCGCCGGTCTGTTCAGTTTTGCCCGCAAGGGCATGTTTGCCCATTAGGATTCTCGAGAGACGG
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| DNA Sequence for Gene |
>PSYRB_RS22140
ATGAACATCACCACCTTTGCAAAACGTTTGTGCCTGCTTGTTCCACTGATTATCACCCCGACTGTGTGGGCGGCAGAGCAGATGACGCCTGCTGCACCGC AACTGGCGGCCAAGTCCTACGTGCTGATGGATGCCACCAGTGGCAACGTCCTGGTCGAGAACAATGGTGATCAGCGTCTGGCTCCTGCCAGCCTGACCAA GCTGATGACCGCCTACATCGCGACCCTGGAAATCCGTCGCGGCCAGATCGGCGAAAACGATCCGGTGACGATCAGTGAAAACGCCTGGCGCACAGGCGGT TCGCGGATGTTCATCAAGGTCGGCAGCCAGGTCACGGTCAGCGACCTGTTGCACGGCATCATCATCCAGTCGGGTAACGACGCCAGTGTCGCGATTTCCG AGCACATCGCCGGCAGCGAAGACGCCTTCGCCGACATGATGAACAAGACTGCCGGCGACCTGGGCATGACCAACAGTCACTTTATGAACCCGACCGGTCT GCCGAACCCTGAGCACTACTCGTCGGCTCACGACATGGCGATCCTGGCGCGCGCGATCATTCACGAGGACCCGGCCCACTATGCGATCTACTCGCAGAAG GAGTTCTTCTGGAACGGCATCAAACAGCCTAACCGTAACCTGCTGCTGTGGCGCGACAAGACCGTTGACGGTCTGAAAACCGGTCACACCGATGAAGCCG GCTACTGCATGGTGTCCTCGGCAGTACGTGACGGCATGCGTCTGATCGCCGTAGTGTTCGGCACCAACAGCGAACAGGCCCGTGCGGCGGAAACCCAGAA GCTGCTGACCTATGGCTTCCGTTTCTTCGAAACCCAGAACTTCTATCAGAAGGGCACCGAGCTGGCCCAGGCCACGGTCTGGAAAGGCACCGAGCGTCAG GTCAAGGCCGGTCTGGCTGAAGATCTGAGCATGACCATGCCAAAAGGCGACATGAAGAAGCTGTCTGCCAGCATGACCATGAACCCGCAACTGGTTGCGC CAATCGCCAAGGGCGACGTGATCGGCAAGGTCGAGGTCAAGAAAGACGATCAGGTGGTTCACACCGCCAATCTGATTGCGCTCGATGGGGTTGAGGAAGG TGGTATTTTCCGCCGCGTGTGGGATAGCATCCGCCTGTTCTTCTACGGCTTGTTCAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCAGTAACCAATGCCGACCTTCTCGCGGCCTGCTCATGATCTGAGCGGGCCGCGTGTCCGTCGTCACGGCTTGTGAGACCTTTACTGCCATGACTGATA CCGACATCAAGTCGCACAAAATAGAATTTCCCTGCAATGACTACCCGATCAAGGTGATCGGTGACACCAGTGTGGGCTTTACGGCGGCCGTGATGGAAGT GCTTGAAAAGCATGCCACGGTCGACCTCAAGACGCTCGCCGAGCGTCAGAGCAGCAACGGCAAATACACCACTGTGCAACTGCACATTGTCGCTACCGGC GAAGACCAGTTGCGCGATATCAATAGTGCCTTGCGCGCTACGGGTTTCGTGCACATGGTGCTCTGATGGCGGGTACGCTGGGTTTTCGTGATCTGGGCCT GATCGATTACGAAACCGCCTGGCACGCCATGAAGCGCTTTACCGACGAGCGTGGCCGCGAGGCTGCCGATGAGGTCTGGCTGGTTCAGCATCCGCCGGTT
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| Amino Acid Sequence |
>D-alanyl-D-alanine carboxypeptidase
MNITTFAKRLCLLVPLIITPTVWAAEQMTPAAPQLAAKSYVLMDATSGNVLVENNGDQRLAPASLTKLMTAYIATLEIRRGQIGENDPVTISENAWRTGG SRMFIKVGSQVTVSDLLHGIIIQSGNDASVAISEHIAGSEDAFADMMNKTAGDLGMTNSHFMNPTGLPNPEHYSSAHDMAILARAIIHEDPAHYAIYSQK EFFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGMRLIAVVFGTNSEQARAAETQKLLTYGFRFFETQNFYQKGTELAQATVWKGTERQ VKAGLAEDLSMTMPKGDMKKLSASMTMNPQLVAPIAKGDVIGKVEVKKDDQVVHTANLIALDGVEEGGIFRRVWDSIRLFFYGLFN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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