Pseudomonas syringae pv. syringae B301D, PSYRB_RS15550

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. syringae B301D, complete genome. [Details]
DNA Sequence Upstream of Gene
ATGCAACAACAAGCCCGGCCAATACATCGGCACGAACGTTGGAAAACCACGTAGCTTTGATTTTTTCTAACATGGGAATACCTGTGACAGACGCAGCAAG ACGCACGGCAGCGATTGCCGGACGAGCAGGAGCATCGGTTTTCGATTGAGTAGTCAGATTGGGAGTGGCGGCGACCAAAAAACGGGCGCAGCAACGGGCG ACTGCAGCAAGAAGGCAGTCAGGTGTTGCGAGGGGGGCGTAGCGCTAAGGCGGCGTAGGCAGCCAGTTGGAACGGGGCACGTCTATTTCCTTCGATGGGT CGTAAGGCGCTGGCATCATAGACCTATCCGTTTGAGGGGTTCAAGCGTAAGTCATCTCTCCGAACGACCTGAGTGACGGATGGCGCAACCCCCTGAAACA CGTGAACAAGCCATCTGATACTGTTTTTTACAGCTGTTGTGTCTCTGTTCGTTATGGCCGGTTTCGCTCATGATGCAGCCTTGTCGATTCGATGCCGCTT
DNA Sequence for Gene
>PSYRB_RS15550
ATGAAACGCTACGAAAAATTCGCCGCCGACATCTCGGAAATGATTCGCAGCGGCGTCCTGCCCGCCGGGGAAAAAGTCCCGTCCGTACGGGTCGCGAGTC GCACCTGGTCCGTCAGCCCGGCAACGGTCTTCAAGGCCTATTACCTGCTGGAAGACAAGGGACTGATTCAGGCCCGCGCACGCTCCGGGTATTACGTGCG TGAGCATGCCGCCAACGCACTGACCGAACCTGAACTGGTCAGACATACCAGCGAAGGTACCGAACTGGGCGTCAGCGACCTGATCTTTTCAGTGCTCGGC TCGCTCAAGGACCCGGACACCGTACCGTTCGGCTCGGCGTTTCCCAGCCCGCACCTGTATCCGCTGGCGAGCCTGGCGAAGTCGATGGCGTCAGCTGTGC GTGCGCTGACGCCTGCAGGCATCGTCAGCGACATGACCACCGGGAATCCCGAGCTGCGCCGACAGATCGCCCTGCGCTACATGATCAGTGGCGTGCGCTT GCCGGCGGACGAACTGGTCATTACCAATGGCGCGATGGAAGCCCTGAACCTGTGCCTGCAGTGCGTCACCGAGCCCGGCGACCTGGTCGCCATCGAAGCC CCGGCGTTCTATGCCTGCCTTCAAGTGCTGGAGCGTCTGAAGCTGAAAGCCGTCGAAATCCCCGTGCATCCGCGTGACGGCGTGGACCTCGACTCGCTGC AGGACAGCCTGACACGCCTGCCGATCAAGGCTTGCTGGTTCATGAGCAGCTTTCAGAACCCATTGGGCGCGAGCATGACTCAAGAAAACAGGACCAGGCT CTACAACCTGCTGGAACAGCAGCAGATCCCGCTGATCGAGGACGATGTGTACGCCGAGCTGTATTACGGCGCCAACGCGCCTCACCCGGTGAAAAGCCTG GATCGCAGTGGGCTGGTAATGCACTGCAGCTCGTTTTCCAAGACCCTCGCGCCCGGCTATCGGGTCGGCTGGGTGGCAGGCGGCCGTTACACCGAGCAGA TTGACCGCCTCAAGCTCATGACCACCCTCTCCCCTTCGGTCCCCGCCCAGGCCGCGCTCGCCGACTACCTCAAGCACGGCGGCTATGACCGCCATCTGCG CAAACTGCGTGACACCCTCGAACTGCAACAAGGCGCGATGCTCGCTGCTGCCGCCCGCTATTTCCCGGCGGCGACACGCGTCACCCGCCCCCTCGGCGGC TACTTTCTGTGGTTCGAATTCCCCGAGCAGGTTGATTCGCTGCAGCTCTTTCAACTCGCACTCGCGCAGGGCATCAGCCTCGCGCCCGGCCCGATCTTTT CCGCTTCCAGGCGCTTCAAGAATTGCGCGCGCCTGAACTACGGCACACCCTGGGATGAACGCAGCGAGCAGGCCATGGCGATGCTGGGGCGTATCCTCGC GTCGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCATTTTCATGCCTTCACAAAGGCAACTGATCCGTATTTTTAAGCCGTTTCTGAATCTGTACCAGAATCAGTCCGAGCACGATAATGGCAGCGCTTTCAA ACGCGCAGGATAACGGCCAAAAGCGACGCCTGCGGCTCGTTACAGACAGATCGATCAGCAGGAGACGCTCATGGGCAAGCTCGGACTTTCTTTGATAGGT TTTTTATTGTTGGCAATCGCGGTGGGTTTGTTGGGGACTATTTCGCCGTATTGAGGCGCCGCGAGCCAGGAATACTGAAGCCGCGTTGCATTACCGCCAA AACGAAAAAACCCGCCATTAGGCGGGTTTTTCTTGTTCAAAGGCCTTATACATTGCCTTTGAAGTATTGTCTGGCTCCACGACCTGGACTCGAACCAGGG ACCCAGTGATTAACAGTCACTTGCTCTACCAACTGAGCTATCGCGGAATGAGCGCTATGTTACTGATTCGGAAAAGGAAGTCAAGCAGAGCAGAAAAAAA
Amino Acid Sequence
>GntR family transcriptional regulator
MKRYEKFAADISEMIRSGVLPAGEKVPSVRVASRTWSVSPATVFKAYYLLEDKGLIQARARSGYYVREHAANALTEPELVRHTSEGTELGVSDLIFSVLG SLKDPDTVPFGSAFPSPHLYPLASLAKSMASAVRALTPAGIVSDMTTGNPELRRQIALRYMISGVRLPADELVITNGAMEALNLCLQCVTEPGDLVAIEA PAFYACLQVLERLKLKAVEIPVHPRDGVDLDSLQDSLTRLPIKACWFMSSFQNPLGASMTQENRTRLYNLLEQQQIPLIEDDVYAELYYGANAPHPVKSL DRSGLVMHCSSFSKTLAPGYRVGWVAGGRYTEQIDRLKLMTTLSPSVPAQAALADYLKHGGYDRHLRKLRDTLELQQGAMLAAAARYFPAATRVTRPLGG YFLWFEFPEQVDSLQLFQLALAQGISLAPGPIFSASRRFKNCARLNYGTPWDERSEQAMAMLGRILASF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site