Strain | Pseudomonas syringae pv. syringae B301D, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
ATGCAACAACAAGCCCGGCCAATACATCGGCACGAACGTTGGAAAACCACGTAGCTTTGATTTTTTCTAACATGGGAATACCTGTGACAGACGCAGCAAG ACGCACGGCAGCGATTGCCGGACGAGCAGGAGCATCGGTTTTCGATTGAGTAGTCAGATTGGGAGTGGCGGCGACCAAAAAACGGGCGCAGCAACGGGCG ACTGCAGCAAGAAGGCAGTCAGGTGTTGCGAGGGGGGCGTAGCGCTAAGGCGGCGTAGGCAGCCAGTTGGAACGGGGCACGTCTATTTCCTTCGATGGGT CGTAAGGCGCTGGCATCATAGACCTATCCGTTTGAGGGGTTCAAGCGTAAGTCATCTCTCCGAACGACCTGAGTGACGGATGGCGCAACCCCCTGAAACA CGTGAACAAGCCATCTGATACTGTTTTTTACAGCTGTTGTGTCTCTGTTCGTTATGGCCGGTTTCGCTCATGATGCAGCCTTGTCGATTCGATGCCGCTT
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DNA Sequence for Gene |
>PSYRB_RS15550
ATGAAACGCTACGAAAAATTCGCCGCCGACATCTCGGAAATGATTCGCAGCGGCGTCCTGCCCGCCGGGGAAAAAGTCCCGTCCGTACGGGTCGCGAGTC GCACCTGGTCCGTCAGCCCGGCAACGGTCTTCAAGGCCTATTACCTGCTGGAAGACAAGGGACTGATTCAGGCCCGCGCACGCTCCGGGTATTACGTGCG TGAGCATGCCGCCAACGCACTGACCGAACCTGAACTGGTCAGACATACCAGCGAAGGTACCGAACTGGGCGTCAGCGACCTGATCTTTTCAGTGCTCGGC TCGCTCAAGGACCCGGACACCGTACCGTTCGGCTCGGCGTTTCCCAGCCCGCACCTGTATCCGCTGGCGAGCCTGGCGAAGTCGATGGCGTCAGCTGTGC GTGCGCTGACGCCTGCAGGCATCGTCAGCGACATGACCACCGGGAATCCCGAGCTGCGCCGACAGATCGCCCTGCGCTACATGATCAGTGGCGTGCGCTT GCCGGCGGACGAACTGGTCATTACCAATGGCGCGATGGAAGCCCTGAACCTGTGCCTGCAGTGCGTCACCGAGCCCGGCGACCTGGTCGCCATCGAAGCC CCGGCGTTCTATGCCTGCCTTCAAGTGCTGGAGCGTCTGAAGCTGAAAGCCGTCGAAATCCCCGTGCATCCGCGTGACGGCGTGGACCTCGACTCGCTGC AGGACAGCCTGACACGCCTGCCGATCAAGGCTTGCTGGTTCATGAGCAGCTTTCAGAACCCATTGGGCGCGAGCATGACTCAAGAAAACAGGACCAGGCT CTACAACCTGCTGGAACAGCAGCAGATCCCGCTGATCGAGGACGATGTGTACGCCGAGCTGTATTACGGCGCCAACGCGCCTCACCCGGTGAAAAGCCTG GATCGCAGTGGGCTGGTAATGCACTGCAGCTCGTTTTCCAAGACCCTCGCGCCCGGCTATCGGGTCGGCTGGGTGGCAGGCGGCCGTTACACCGAGCAGA TTGACCGCCTCAAGCTCATGACCACCCTCTCCCCTTCGGTCCCCGCCCAGGCCGCGCTCGCCGACTACCTCAAGCACGGCGGCTATGACCGCCATCTGCG CAAACTGCGTGACACCCTCGAACTGCAACAAGGCGCGATGCTCGCTGCTGCCGCCCGCTATTTCCCGGCGGCGACACGCGTCACCCGCCCCCTCGGCGGC TACTTTCTGTGGTTCGAATTCCCCGAGCAGGTTGATTCGCTGCAGCTCTTTCAACTCGCACTCGCGCAGGGCATCAGCCTCGCGCCCGGCCCGATCTTTT CCGCTTCCAGGCGCTTCAAGAATTGCGCGCGCCTGAACTACGGCACACCCTGGGATGAACGCAGCGAGCAGGCCATGGCGATGCTGGGGCGTATCCTCGC GTCGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCATTTTCATGCCTTCACAAAGGCAACTGATCCGTATTTTTAAGCCGTTTCTGAATCTGTACCAGAATCAGTCCGAGCACGATAATGGCAGCGCTTTCAA ACGCGCAGGATAACGGCCAAAAGCGACGCCTGCGGCTCGTTACAGACAGATCGATCAGCAGGAGACGCTCATGGGCAAGCTCGGACTTTCTTTGATAGGT TTTTTATTGTTGGCAATCGCGGTGGGTTTGTTGGGGACTATTTCGCCGTATTGAGGCGCCGCGAGCCAGGAATACTGAAGCCGCGTTGCATTACCGCCAA AACGAAAAAACCCGCCATTAGGCGGGTTTTTCTTGTTCAAAGGCCTTATACATTGCCTTTGAAGTATTGTCTGGCTCCACGACCTGGACTCGAACCAGGG ACCCAGTGATTAACAGTCACTTGCTCTACCAACTGAGCTATCGCGGAATGAGCGCTATGTTACTGATTCGGAAAAGGAAGTCAAGCAGAGCAGAAAAAAA
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Amino Acid Sequence |
>GntR family transcriptional regulator
MKRYEKFAADISEMIRSGVLPAGEKVPSVRVASRTWSVSPATVFKAYYLLEDKGLIQARARSGYYVREHAANALTEPELVRHTSEGTELGVSDLIFSVLG SLKDPDTVPFGSAFPSPHLYPLASLAKSMASAVRALTPAGIVSDMTTGNPELRRQIALRYMISGVRLPADELVITNGAMEALNLCLQCVTEPGDLVAIEA PAFYACLQVLERLKLKAVEIPVHPRDGVDLDSLQDSLTRLPIKACWFMSSFQNPLGASMTQENRTRLYNLLEQQQIPLIEDDVYAELYYGANAPHPVKSL DRSGLVMHCSSFSKTLAPGYRVGWVAGGRYTEQIDRLKLMTTLSPSVPAQAALADYLKHGGYDRHLRKLRDTLELQQGAMLAAAARYFPAATRVTRPLGG YFLWFEFPEQVDSLQLFQLALAQGISLAPGPIFSASRRFKNCARLNYGTPWDERSEQAMAMLGRILASF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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