Pseudomonas syringae pv. syringae B301D, PSYRB_RS11170

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. syringae B301D, complete genome. [Details]
DNA Sequence Upstream of Gene
AGGAAGGCCGCTTGCCCAAGGGTGGCGAAGACGCGTTGTCGCTGAGTGTCGACGGCACCGACTACACGAGCACCGGCACCCTGCTGTTTACCGATGTTGC AGTAGACCGGACCACCGGCCAGGTGTCGTTGCGGGCCCGCTTTGCCAATCCCAAGGGCGTGCTGCTGCCCGGTATGTACGTGCGGGTACGCACACCGCAA CGCGTCGACAGCAACGCCATTCTTGTTCCGCAACGTGCCGTTCAGCGCTCCGGTGACGGTGCCGCCCGCGTGCTGGTGATTGCCCAGGACGGCACGGTCG AAGCGCGTCCGGTCAAAACCGGGGCGATGCAGGATTCGCGCTGGCAGATCACCGAAGGCCTGAAGGCAGGCGAACAGGTCATTGTCGGCAACATGACCGG GCTCAGCGCCGGTGACAAGGTCGCCCGCAAATCGCCCTCCGCCCAGCCGCAGACCAAGGCGCAATAAAGCCGCCTTCAGCGCGACCGAGGATCATTGTCC
DNA Sequence for Gene
>PSYRB_RS11170
ATGTCTCTCTTCTTTATCAAGCGCCCCAACTTCGCCTGGGTACTCGCCCTGTTCATCCTGCTCGCCGGGCTGATGGCGCTGCCGTCCCTGCCCGTGGCGC AGTATCCGGACGTGGCGCCACCGCAGATCACCATCACCGCGACCTACCCCGGCGCATCCGCGAAAGTGCTGGTCGATTCGGTGACCAGCGTTATCGAGGA CGAGCTCAACGGTGCCAAGGGAATGCTGTATTACGAGTCGACCAGCAACTCGACCGGCAGCGCGGAAATCAACGTGACGTTCGTGCCGGGCACCAACCCG GACCTGGCTCAGGTCGAGGTGCAGAACCGTATCAAGAAAGCCGAAGCGCGCCTGCCGCAGACGGTCCTCAGCCAGGGCCTGCAGGTCGAACAGGCCAGCT CCGGTTTTCTGTTGATCTACACCCTGAACTACAAGGACGGCGCGGCCAGCAAGGATACTGTCGCGCTGGCCGACTACGCGGCACGCAACGTCAATAACGA AATCAGCCGGGTGAACGGTGTCGGCAGGCTGCAATTCTTCGCCGCCGAAGCCGCGATGCGGGTCTGGATCGATCCGCAGAAGCTGGTGGGCTTCGGCTTG TCCATCGACGACGTGAATGCCGCCATCCGGGCGCAGAACGTGCAGGTTCCGGCAGGCAGCTTCGGTAGCAGCCCAGCCTCGTCACTGCAGGAATTGACGG CGACCCTGGCGGTCAAGGGCACGCTGGACAACCCGGAAGAGTTCGGGCGCATCGTTCTGCGTGCCAACGAAGACGGCTCTGCGGTGCACCTGTCCGATGT GGCGCGTGTGGCGGTCGGCAGCCAGGATTACAGCTTCGAATCACGCCTGAACGGGCAACGCGCCGTCGCCGGTGCCGTGCAACTGTCGCCGGGTGCCAAC GCGATCCAGACGGCCAGAGCCGTCGAGCAGCGGCTCACCGAGCTATCGGTCAATTTCCCGGAAGGCGTCGGGTTTTCGATACCGTACGACACCTCGCGCT TCGTCGACGTGGCCATCGACAAGGTGATCTACACCCTCATCGAAGCCATGGTGCTGGTGTTTCTGGTGATGTTCCTGTTTCTGCAGAACATCCGTTACAC GCTGATCCCGACCATCGTGGTCCCGGTGTGTCTGGCAGGGACACTGGCGATCATGTACCTGATGGGCTTCTCGGTGAACATGATGACCATGTTCGGCATG GTGCTGGCCATCGGTATTCTGGTCGACGACGCCATTGTGGTGGTGGAGAACGTCGAGCGGATCATGGCTGAAGAAGGCCTCTCTCCCGCCGCCGCCACGG TCAAGGCGATGCAGCAGGTTTCCGGAGCGATTTTCGGCATCACGCTGGTCCTGGCCGCCGTGTTTCTGCCACTGGCGTTCATGGGCGGCTCGGTCGGGGT CATCTACCAGCAGTTCTCGCTGTCGCTGGCCGTGTCGATTCTGTTTTCGGGTTTCCTGGCCCTGACGTTCACCCCGGCGCTGTGTGCCACGCTGCTCAAG CCGATCCCGGCCGGGCACCATGAAAAGCGTGGTTTCTTCGGTGGTTTCAATCGTCTGTTCGGCAAGTTCACCCACCGTTACGAGCGCGTCAGTTCCAGCA TGATCAAGCGCGCCGGACGCTACATGCTGCTGTACGTCGGTATCGTCGGTCTGCTGGGCTTTTTCTACCTGCGCCTGCCGGAGTCCTTTGTACCCGTGGA AGATCAGGGCTATCTGATCATCGACGTGCAACTGCCTCCCGGTGCCACCCGGTCGCGTACCGACCTCACCGCGCAATTGCTCGAGAACTACATGCTGTCC CGTGAAGCCACGGGCGCGGTGACCATGCTGCTGGGGTTCAGCTTCTCGGGCATGGGTGAAAACGCCGGTCTTGCGTTCCCGACCCTGAAGGACTGGTCGG AGCGCGCCAAGGGCCAGTCGGCGGCTGAAGAAGCGGTGGCGTTCAACCAGCATTTTGCCGGGCTTGGCGACGGCACGGTGATGGCGGTAACGCCACCGCC CATCGACGGCCTGGGCACCTCGGGCGGTTTCTCGCTGCGTCTGCAGGACCGCGCTGGCCTGGGCCGTGAAGCCTTGCTGGCGGCACGCGACAAGCTGCTC GGCGAGGCCAACGGCAATCCGAAGATCCTCTACGCGATGATGGAAGGTCTGGCCGAAGCGCCGCAATTGCGCCTGAGCATCGACCGCGAAAAAGCCCGGG CGCTTGGCGTGAGTTTCGAGTCGATCAACAACGCCCTGTCCACCGCCTTCGGATCCTCGGTGATCAGTGACTTTGCCAATGCCGGACGTCAGCAGCGCGT GGTCGTGCAGGCCGAGCAAAGTGCGCGAATGACCCCGGAAAGCGTGCTCAAACTCTACGTGCCCAATAGCAGCGGCACGCTGGTGCCGTTGGGTGCCTTT GTTTCGACGCACTGGGAACAAGGCCCGGTGCAGATCGCCCGCTACAACGGCTACCCCGCGTTCAGGATTTCCGGCGACGCAGCGCCGGGGGTCAGTACCG GCGAGGCCATGGCGGAAATCGAACGGATCGTTTCCAAGCTGCCGCAAGGCATCGGTTACGAATGGACCGGCCTCTCCTATCAGGAAAGAGTCGCCAGCGG CCAGGCGGCCGGACTGTTCGGCCTGGCGCTGCTGGTGGTGTTTCTGCTGCTGGTCGCACTGTATGAGAGCTGGGCGATCCCGCTGGTGGTGATGCTGATC GTACCCGTCGGCGCGTTGGGTTCCGTGCTGGCCGTGACAGCCGTGGGCATGCCCAACGATGTGTATTTCAAAGTCGGCCTGATCACCATCATCGGGCTGG CGGCGAAAAACGCGATTCTCATCGTCGAGTTCGCCAAGGAGCTGTGGGATCAGGGCCATTCACTGCGCGACGCGGCGCTTCAGGCTGCGCGACTGCGCTT TCGGCCGATTGTCATGACCTCGCTGGCCTTCATCCTTGGCGTGGTGCCGCTGACCCTGGCCACCGGTGCGGGGGCGGCGAGCCAGCGCGCCATCGGCACC GGCGTCATCGGCGGCATGCTCAGCGCGACGCTGCTGGGCGTGGTTCTGGTGCCGATATTCTTCGTATGGGTCCTGTCCGTGCTGCGCCGCAAACCGCATG CGCAACAGGCTACCGAAGACCAGCAGCTGCCTGAGAAGCGCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCAGAGACGGCCGGCGGGCATCAATCCCGCTGGCCCGACCTTGGCTCCGTGTCGGCTTGCGCGTCCGTAGCGGACTTGACGCGGGTCCAGGCCGGTAAC GTACTGGTCGCGATTTCCGACGCCACATTCACCCGGTTGCGCCCCTGCGACTTGGCGGCATACAACGCTCGGTCGGCAAGCTCGATCAGGCCGCGCTGAT CCAGTTGGCGATCCGTGCCGACGAATGTCGCAACACCGAGGCTGATCGTCACGATGCCAAACGGGCTGGCGGGATGCTCGATCTGCTCGTCACGGATCGC CCGCAGGATCTTCTCGGCCACCTGGCGAGCGTTCGACTCATCAGTACCGGGCAACACCACCGCAATCTCTTCACCGCCATAACGGGCGGCGACGTCACTG GGACGACGAATGAACTGCTCGACCACTCGGGCCAGCGCAATCAGGCATTCGTCACCGGCCAGGTGACCGTAATGATCGTTATAGCGCTTGAAATGATCGG
Amino Acid Sequence
>multidrug efflux RND transporter permease subunit
MSLFFIKRPNFAWVLALFILLAGLMALPSLPVAQYPDVAPPQITITATYPGASAKVLVDSVTSVIEDELNGAKGMLYYESTSNSTGSAEINVTFVPGTNP DLAQVEVQNRIKKAEARLPQTVLSQGLQVEQASSGFLLIYTLNYKDGAASKDTVALADYAARNVNNEISRVNGVGRLQFFAAEAAMRVWIDPQKLVGFGL SIDDVNAAIRAQNVQVPAGSFGSSPASSLQELTATLAVKGTLDNPEEFGRIVLRANEDGSAVHLSDVARVAVGSQDYSFESRLNGQRAVAGAVQLSPGAN AIQTARAVEQRLTELSVNFPEGVGFSIPYDTSRFVDVAIDKVIYTLIEAMVLVFLVMFLFLQNIRYTLIPTIVVPVCLAGTLAIMYLMGFSVNMMTMFGM VLAIGILVDDAIVVVENVERIMAEEGLSPAAATVKAMQQVSGAIFGITLVLAAVFLPLAFMGGSVGVIYQQFSLSLAVSILFSGFLALTFTPALCATLLK PIPAGHHEKRGFFGGFNRLFGKFTHRYERVSSSMIKRAGRYMLLYVGIVGLLGFFYLRLPESFVPVEDQGYLIIDVQLPPGATRSRTDLTAQLLENYMLS REATGAVTMLLGFSFSGMGENAGLAFPTLKDWSERAKGQSAAEEAVAFNQHFAGLGDGTVMAVTPPPIDGLGTSGGFSLRLQDRAGLGREALLAARDKLL GEANGNPKILYAMMEGLAEAPQLRLSIDREKARALGVSFESINNALSTAFGSSVISDFANAGRQQRVVVQAEQSARMTPESVLKLYVPNSSGTLVPLGAF VSTHWEQGPVQIARYNGYPAFRISGDAAPGVSTGEAMAEIERIVSKLPQGIGYEWTGLSYQERVASGQAAGLFGLALLVVFLLLVALYESWAIPLVVMLI VPVGALGSVLAVTAVGMPNDVYFKVGLITIIGLAAKNAILIVEFAKELWDQGHSLRDAALQAARLRFRPIVMTSLAFILGVVPLTLATGAGAASQRAIGT GVIGGMLSATLLGVVLVPIFFVWVLSVLRRKPHAQQATEDQQLPEKR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site