Pseudomonas syringae pv. syringae B301D, PSYRB_RS10055
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B301D, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGAAATTCTGCGCGATTACCGCGACCGCCTGCCCGCGGCGGTTGTGCACTGTTTCACCGGCGAGCGCGCCGCGCTGTTCAGTTACCTGGACCTTGACC TGCATATCGGCATCACCGGCTGGATCTGCGACGAACGACGCGGCACCCACCTGCATGCGCTGGTGGGCAATATCCCTCGCGGCCGGCTGATGCTGGAAAG CGATGCGCCCTACCTGCTGCCACGCAGCCTGCGCCCCAAGCCGAAAAACGGTCGCAACGAGCCGGCTTACCTGCCGGAAGTCTTGCGCGAAGTAGCCTTG CATCGGGGCGAAACGCAGGAAGACCTCGCACGCCACAGCACGGATTGCGCGCGGCAGTTTTTTGCTTTTCCGACGTTGAAAAAATCCACGAAGGATTAAA ATCTGCAGCTTTGTTGACCCGTATCAAGGGTCTCTTCGGTGGCTGAGGCACAGTGATGGCATCTTGCTGCTACTTCAACCGATTACGAAGAAGACCCCTC
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| DNA Sequence for Gene |
>PSYRB_RS10055
ATGGCCTCATGGCTTGGCAACCTGTCACTGAAATACAAGTTCTGGGCCGTCAACGCGGTCGCTTTCGTCACCACCCTGTTGCTGGTGCTGTACGCCATGC AGACAGAGCAACAAGCGCGGACCGATGTGTCGCGTCAGGCAGCACAAGCGCAGGCGCGCCTGCTGGCCGCCTGGCCCGTCGACGCAGCACTGCCCTCCAG CGATACAATACTGACTTACCGCCAGGGTCAGACACCGGTTGTCGATGGCCTGGCGCTGCCGGAACTGGCTGACGCCCGCAACTGGGTGGCGCTGGACAAA CCCGTCGGCGATCGATGGCTGAGCGGTGCGCAGATCATCACTCGCGGCGCCGAGCAACGGATTGCGCTACTGGCATTCACCCCGACCTTCATGCACATCC TGCTGGATCGCTTCACGCATTACGCGGTCGCGGTTTTCGTGCTGATGCTGTTGATGCTCTGTGCCTCGCAGCTGCTGATCCGCTTTCTGCTCAGCCAGCT CAACGCGCTCAAGGATGTGATGCTGCACGTCGAAAAAAGCGGCGACCTGGCGGCCCGTGTTCCCAACCGCAGTGACGATGAGGTCGGACAAATGGCCAAG GCCTTCAATGCCATGCAGGCCGGTTACCAGCGGGTGGTCAACACCGTTTCGCAAACTGCCGGGCGCCTCGATCAGGGCGCAGCGCATCTGGCGGCGGGCA TGAAGGAGGTGCGCCAAGGCATGCTCGGTCAGCAAAGCGAAACCGATCAGGTGGCCACGGCCATCAACGAAATGACGGCCACGGTCCATAACATTGCCCA GCACGCTACAGCCACCCGCGATCAGTCGCAGACGGCTGACGCACTGGCGGGCAGCGGCAAAGTAGTGGTCGACCGTGTGCAGGTGTCCATCGCGGGGCTT TCCAGCGGCGTGCAGCAAACGGCGGAAATGATCCAGCGCATGGCCGAAGACAGCCAGAAGATCAACGGCGTGGTCAACGTCATCCACAGCATTGCCGAAC AAACCAATCTGCTCGCCCTCAACGCAGCCATCGAGGCCGCACGCGCCGGGGAAATGGGTCGGGGTTTTGCCGTGGTCGCCGATGAGGTACGCAATCTGGC GAAGCGGGTGCAGACCTCCACCGATGAAATCACCACGATGGTCTCGACCCTGCAAAGCGGCACCCGCGATGCCGTGGATTTCATGCAGGAAAGCTCGCAC AAGGCTGAAGAATGCCTGCAGCAGGCGCGGGAAGCGGGTGATGCGCTGGCGGCGATTGCCGGTGCCGTGGCACAGATGCGCGAAAGCAATACGCAGATCG CCGTGGCGGCCCAGCAGCAAAGCCAGGTCGCCGAGGAGATGAACCGTGCGGTGGTGAGTATCCGCGATGTCACCGAACGCACGGTGATCCAGACGGTTGA CTCGGCCAGCACCAGTGACGAGCTGGCTACGCTGGCAGGCGAACTGAATGCCGCCATTGGCCAGCTCAAGCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAGGCTATCGCCGCGATAGACAGGCTTGACTCGTCAGCCCTCTGCGCGCGGGCCTATCCTTCAGGCATTGAACGACGCTTTACGCGTTGCCTGAAGAGGA CCGCATCATGAACAAGCCACTTTCCGATCTGCAGTTGAATCAATGGCGTGACAGCAACGACAGTCAGGAGCACTCGGCCAGTCTGGCTCTGTACCTGATC GCCGTGCCGCTGTTCATTCTGGCGGCCCTGCTGATCCTCAACGGCCTGTTTTCCGAAAGCCTTTCATCGGTTGCCATCGGCGTGATCGGCCTGGTGGCGG CGCTGGGGTTTCAGCGCCAGGACGCCGCCCGGGCCGCTCGCAAACCTTGATCCGGTTGCCGGTCAGCCAAATACGGTAACCGTCTGGCGGCTGATTGCGA TCAGCTCGCCGTCGGGGCTCCACAATGCCGCGGCGGTATGGCCATAGCCATCGCGGGCATGCTCGATGACTGCGCGGTAGCTGCACCACTGCAGGGTATC
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| Amino Acid Sequence |
>chemotaxis protein
MASWLGNLSLKYKFWAVNAVAFVTTLLLVLYAMQTEQQARTDVSRQAAQAQARLLAAWPVDAALPSSDTILTYRQGQTPVVDGLALPELADARNWVALDK PVGDRWLSGAQIITRGAEQRIALLAFTPTFMHILLDRFTHYAVAVFVLMLLMLCASQLLIRFLLSQLNALKDVMLHVEKSGDLAARVPNRSDDEVGQMAK AFNAMQAGYQRVVNTVSQTAGRLDQGAAHLAAGMKEVRQGMLGQQSETDQVATAINEMTATVHNIAQHATATRDQSQTADALAGSGKVVVDRVQVSIAGL SSGVQQTAEMIQRMAEDSQKINGVVNVIHSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRNLAKRVQTSTDEITTMVSTLQSGTRDAVDFMQESSH KAEECLQQAREAGDALAAIAGAVAQMRESNTQIAVAAQQQSQVAEEMNRAVVSIRDVTERTVIQTVDSASTSDELATLAGELNAAIGQLKL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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