Pseudomonas syringae pv. syringae B301D, PSYRB_RS09590
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B301D, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGTGCGGCGTCGAGCTTGGCTTTTTGCGTCGAAGGATCGATTTCGACCAGCAAGTCGCCTTCCTTGACCTGATCGCCGACCTGGGCGTGGATTTTCATGA TCTGCCCGCTGGCCTGCGAGCCCACGTCCACGTAGCTGCGCGGCTGCAGGGTACCCAACGCCGTGACGCTGTTTTCGATCGTGCCGCGGGTCACCGTCAC AGTTGCGGCGCTGCTTTTGCTGTCGGGCAGGATCTGCCAGGCGCATACGGCAATGACCGGGAACAGGCACAGCGCCACCAGGAGGGCGCGTCGAGGATGT CGAGAGCGTTTCATGCAGATTCCTGCGCTGGGAGATCAGTCGGTCGGTGAGCGACGGCCACGAGAGCTGCCCTTTAAACGAGGCATGCCGGCAGGAATTT AGCGTCGATCACGGGTTGTCCGCTTCGGCTAAACATCAGCGTCCGTGCTTCGTTTAACGGGAGCGGCTAATTCGGGTCGTCTTGTCGAGTTGGAGTCAGC
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| DNA Sequence for Gene |
>PSYRB_RS09590
GTGATTATTTTCAGACCCCTGTGCGGTTTTCTGTTTGCAGGTCTTTCATTCGCTGTGATTTTGCCTGCGCAGGCCTTGGTTGAGCCTGGAAATCAGGCGG CCAGGGCCGAGATCCGGCGGACCGGTTTTGGCGTGCCGCACATCGTTGCCGCCAATGAGCGCGGTCTGGGCTACGGCATCGGTTATGCCTACGCGCAGGA CAACCTGTGCCTGCTGGCCAATGAGGTGGTCACCGTCAATGGCCAGCGCTCGCGCTATTTCGGCCCGGACAAGGCGACCCTTGAGCAGCGCAACAACATG GCCAGCGACCTGCTGTTCCAGTGGCTCAATACGCCGCAGGCACTGGCGGATTTCTGGAATGCGCAGCCGCGGGAGATTCGCCAGTTGATGCAGGGTTATG TCGCCGGTTACAACCGTTCGCTGGCCGAGCAGACCACCCAAGGCCTGCCGCAACCCTGTGCGGCCGAGTGGGTTCGACCGATCAGCACCGATGATCTGCT GCGTTTGACCCGCCGCCTGCTGGTCGAGGGGGGCGTTGGGCAGTTTGCCGAAGCGCTGGCCGGTGCCACGCCGCCTGCACAGCAAAAACCACTGCAGGTC GATGCTCAGCAGGCTCAGGCGCTGCAACTGGCCGCTGCGCGTAACCAGCGTTTTGCTCTGGAACGCGGCAGCAATGCCGTGGCAATAGGACGCGAGCTGT CCGCCAACGGACGCGGCATGCTGTTGGCCAATCCGCATTTCCCATGGGGCGGCGGCATGCGTTTCTATCAAATGCACCTGACCATTCCCGGCAAACTCGA CGTGATGGGCGCAGCGCTGCCGGGCCTGCCGCTGATCAACATCGGCTTCAATCAGCATCTGGCCTGGAGCCATACCGTCGACACGTCGAAACACTTCACG CTGCATCGCCTGCAGCTCGACCCGAAGGATTCCACCCGTTACCTGCTGGATGGCCAATCGGTTGCCATGGGCAAGCAGCAGGTGAGTGTCGACGTGAAGC AAGCGGATGGCAGCCTGAAGTCGGTGCCACGCATCGTCTATTCGTCCATATTCGGTCCGGTGGTGCAATGGCCGGGCAAGCTGGACTGGGATAGTAAGTT TGCCTTCAGTCTGCGTGATGCCAACCTGCAAAATGATCGGGTGTTGCAGCAGTGGTATGCGATGGACAAGGCCGACAGCCTCAAGGCGTTTCAGGATTCG GTACGTAAGATCCAGGGCATCCCGTGGGTCAACACCCTGGCGGTGGATGCCCAGGGGCAGGCGCTGTACATGAACCTCTCGGTGGTGCCGAACGTTGATG CCGCCAGGCTTGCCCGATGCAGTGATCCGCGCATCGGCACAGAGCTGATCGTGCTCGACGGCTCGCGCAGTGAATGCAACTGGGAGGTCTCCGCAGAGGC AGCACAAGCCGGCATCTATCCGTCCTCGCGCCAGCCGCAGTTGCTGCGGACCGATTTCGTGCAGCATTCCAACGATTCGGCGTGGATGGTCAATCCCGCT GCGCCGCTGCAGGGCTTTTCGCCGCTGATCAGCCAGGACGGCCAGCCGCTGGGACAGCGAGCACGTTTTGCCCTGGATCGGCTGGGCAGCCTGAAGACGG CGGGCAAGATCAGCGTCGAGAACCTGCAAGCGATGGTCATGGACAACGAGGTGTATCAGGCCGGGCAAGTGCTGCCGGATCTGCTCAGGTTCTGTGCCTC GGAGCTGGGTGATGATGCGGCGCGTCTGACGCCGCTGTGTACCGCACTGAAAGCCTGGGACGGGCGTGCTGACCTGAACAGCGGCATCGGCTTCGTGTAC TTCCAGAGAATCGTGACGTCCATGCAGGCTGTGGCCTCGCGCTGGCGTGTTGCGTTCGACCCGCGGGACCCGGTTCACACGCCGAGCGGGCTGGCGATTG AGAACCCTCAGGTCGCCACTGCATTGCGCGCTGCCATGTTGGCCGCAGTGGATGAAGTGGCCAAAGCAGGCCTCTCGGCAGGCAGTAAATGGGGCGACAT TCAGGTCTCCAGCATCAGCGGCAAGCAGATCCCGATTCACGGCGGGCCGGCCGGGCTGGGCGTCTACAACGCCATGCAGACAATCGCTGGCAAGGACGGC AAGCGCGAGGTGGTCAGTGGCACCAGCTACCTGCAGGTGGTGACGTTCGACGAGCAGGGCCCCAAGGCGCAGGGTCTACTGGCGTTCTCGGAGTCGAGCA ATCCACAGTCAGCCCATTCAAGCGACCAGACTGAGGCGTTTTCAAAAAAGCGGTGGCAGGCGTTGCCGTTCACTGAACAGCAGATCAAGGCTGATCCTGC GTATGAGGTGCAGGTGATAAGCGAGGGGGCCAATCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAGAGGCAAGAAAAGCGTTTGGGCCATGCGGCCCAAATGCGCTTGCCGGGAATCAGCCGCCGGGTGTATCGATGTCGGCGTCAACACCCGTGGTTGGCTG ATGATTGCGTAAGTCCTCGGTTTTTTCTTCCGGCTCATGGTCAGGCACATAGGCGCTGTCGCTGGTTGACTGGCTCTGCGACTGAGTCTGTGACTGGCTG GGGGAAGGCGTCTGGCCCTGGCTCTGGCCATTGCCCTTTTCAGTCTCGGGTTTCACGTCCCCGACTTGCGGCTCGATTGCCGGATCGTTGCGGTCCGGGC CCGGGCTGGCAGGTGCGTCCTGATTTGGCGTCGGTTCTTTCTGACGTTGCGGTTCGATAGACATGAGTACCTCGATATCTGGTTCAGAAAATGTGCTGAC AGAGTTTCGAGGCAGGTTTTTTCAGATCGTTCGATGGAAAGTGCCCAGCGGAGCTGGGAGCTGGGAGCTACAAGCTGCAAGCTACAAGCAAGAGCAGTTC
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| Amino Acid Sequence |
>acyl-homoserine lactone acylase subunit beta
MIIFRPLCGFLFAGLSFAVILPAQALVEPGNQAARAEIRRTGFGVPHIVAANERGLGYGIGYAYAQDNLCLLANEVVTVNGQRSRYFGPDKATLEQRNNM ASDLLFQWLNTPQALADFWNAQPREIRQLMQGYVAGYNRSLAEQTTQGLPQPCAAEWVRPISTDDLLRLTRRLLVEGGVGQFAEALAGATPPAQQKPLQV DAQQAQALQLAAARNQRFALERGSNAVAIGRELSANGRGMLLANPHFPWGGGMRFYQMHLTIPGKLDVMGAALPGLPLINIGFNQHLAWSHTVDTSKHFT LHRLQLDPKDSTRYLLDGQSVAMGKQQVSVDVKQADGSLKSVPRIVYSSIFGPVVQWPGKLDWDSKFAFSLRDANLQNDRVLQQWYAMDKADSLKAFQDS VRKIQGIPWVNTLAVDAQGQALYMNLSVVPNVDAARLARCSDPRIGTELIVLDGSRSECNWEVSAEAAQAGIYPSSRQPQLLRTDFVQHSNDSAWMVNPA APLQGFSPLISQDGQPLGQRARFALDRLGSLKTAGKISVENLQAMVMDNEVYQAGQVLPDLLRFCASELGDDAARLTPLCTALKAWDGRADLNSGIGFVY FQRIVTSMQAVASRWRVAFDPRDPVHTPSGLAIENPQVATALRAAMLAAVDEVAKAGLSAGSKWGDIQVSSISGKQIPIHGGPAGLGVYNAMQTIAGKDG KREVVSGTSYLQVVTFDEQGPKAQGLLAFSESSNPQSAHSSDQTEAFSKKRWQALPFTEQQIKADPAYEVQVISEGANR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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