Pseudomonas syringae pv. syringae B301D, PSYRB_RS02395
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B301D, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCCGAGTGATGAGTACGCCCTCCCAACCGGGCATCAATGCACTGGCGATGGTGAACACCGATGCGCAGAACAACGCCATGACCATCACCGACTTGCGCCC GAGCCTGTCTGATATAGGCCCGGTGATCAGCAGGCCGATGGCGAGCATTGCCGTGGCAACTGACAGGATCAGGCTGCTCTGGGCTGCCGAGAGCGAAAAC TCGCTGGACAGTGTCGGCATCATCGGCTGTACGCAATACAGCAGGGTGAAGGTCGAAAACCCGCCAGCGAACAACGCCAGTGCCGTGCGTTTGAACAGCG GCGTGTTCTTTTCGATATAGCGGTCGCCGGACGGCCCGGTGGACGTGTTCAGGTCAGTGATGGGCGGGGCGACGGCAGGATTCAAGGAAGACCTCGGGCA CGATTGGGCGGGCAGTGAAAAAATCATATAGCCCGCTAATCATTCCATCCAATATATTGTTCGACCTGTTTAATAGGTAAAACGACTTAATGGAGGCCGC
|
|
| DNA Sequence for Gene |
>PSYRB_RS02395
ATGGAATTGCGTCATCTGCGTTACTTCATCGCGGTTGCCGAAGAGCTGCATTTTGGCCGCGCAGCGCAGGCGCTGGGGATTTCGCAACCGCCGCTCAGCC AGCAGATTCAGACGCTGGAGCAGGAACTGGGCACGCGTCTTTTCGAACGCACCAACCGGCGCGTCGAGCTGAGCGAATCCGGGCGGCTGTTTCTCGACGA AGCACGGCTGGTGCTGGCACAGGTCGACAAGGCCACTGATGTTGCCCGGCGTGCGCAACTGGGTGAAATCGGCGAGCTGAAGATTGGCTTCACCTCGTCT GCGCCGTTTACGTCGAGCATCCCGCAGGCGATTTTTGCCTTCCGTCAGGCCTGTCCGGACGTGCACCTGACCCTGACCGAGATCACCAGTCAGGAAGTGG CGGCAGGTCTTGAGGACAAGACCATTCAGGTCGGCATCATGCGCCCGCTGGCATTGCCCGATTCACTGGTGGTGTTCGAATTGCTCAGTGAGCCGCTGGT GGCGATCATGCGTGCCGACCATCCGCTGGCGGCAGAAAGCGAGGAAGGGATCTACATGGCGGCACTGGCCGCCGAGCCGTTCGTGTTCTTCCCGCGCACT TATGGCAGCGGTATCTACGCGCAAGTCCTGAGCCTGGCGCGCGCGGCCGGGTTCAGCCCGCTGATCACCCAGGAAGCGGGCGAAGTGATGACCATCATCG GCCTGGTTGCAGCAGGCTTGGGCGTCACCGTACTGCCTGCGTCCTACCGGCGAATGCGCATCGACGGCGTGGTCTACCGCAACGTCCTCGACCCCGGCGC AACCAGCGCGGTGTGGCTGGTGCAACGCAAGGACGAACAATCGCCCATGGCCAAGGCGTTCACCGAGCTGTTAACGCGCAACGTAGGGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTCAAAGGCACGGATGATAGGACGCGGAGCGTCCAGAACGGCATGCGACGCGGAGCGTCGCACGATAGTTGAGATTCTGGCCGCAGGCCGTGGGAGCGAG CTTGCTCGCGATCTGCCGGGAACCGGCAGCAAGACCGGTGCATGCGGTGCAGAACTGTATTCCCACGCTGGAGCGTAGGGAACGATAGGTGTGTGGGCTG GCGCGTGAGGAACGACAGGCGGCTCAGAGAATACCCTTAGCCCCAACGCCTGAAGATCAGCGAGGTGTTCACGCCGCCAAATGCGAAGTTGTTGTTCATC ACGTATTCGTTGCTCATGTGCCTTGGTTCGCCGACGATGTAGTCCAGTTCGCCGCACTGTGGGTCGATGTCGACCAGGTTCAGGGTATGGATATAGCGAT CGCTGTTGAGCATTTCGATGCTGAACCATGATTCCAGCGCGCCGCACGCTCCCAGCGTGTGACCGAGAAAGCTTTTTTGCGAGCTAAGTGGCATGCGCGG
|
|
| Amino Acid Sequence |
>LysR family transcriptional regulator
MELRHLRYFIAVAEELHFGRAAQALGISQPPLSQQIQTLEQELGTRLFERTNRRVELSESGRLFLDEARLVLAQVDKATDVARRAQLGEIGELKIGFTSS APFTSSIPQAIFAFRQACPDVHLTLTEITSQEVAAGLEDKTIQVGIMRPLALPDSLVVFELLSEPLVAIMRADHPLAAESEEGIYMAALAAEPFVFFPRT YGSGIYAQVLSLARAAGFSPLITQEAGEVMTIIGLVAAGLGVTVLPASYRRMRIDGVVYRNVLDPGATSAVWLVQRKDEQSPMAKAFTELLTRNVG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|