Pseudomonas syringae pv. syringae HS191, PSYRH_RS24960
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae HS191, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AATCTCGTAGGACCAGGGCTACAGACGCATTCCACATCTCGCAAATACTGCAGCGTGCGACCATAAATTAGTGTGAAAGTGCCACTAGCTCAGTAAAAAT ACCCTACATCTCTCACAAAACCGTTACAGTTCTTATCTTAAAGTATGAAAGGAAACACCGTGGTGCTGCGCCGTGTCAACCACAACCATGCGGCTCAGGC GTTGGCTATGGTTCTGATGAAGACACGCTATCTATGGTCGTGTTGATTGCACCGAGCCCAGATACTTTTTAATGGGTAAATACTCAGTATTCACAATGGT TTAAGTGAAGACTCGACTGGTTGATGGCTTAACGGCATCATTGCGGTCTGTTTCGCAGATGAGAAAAATGAGCTCGCCTTGAAATTCAGCTCAAATATTC AGGTCTGACAGGCGACATACGCGCTGCCCAGACTACGCTGATTCGTGGTCACGCAAGGCACCGGTGCTAGCTTCCTTCAACCCAGGACTGTGACGTGTAA
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| DNA Sequence for Gene |
>PSYRH_RS24960
ATGGACCTATTAGCCAATGTTCCTAGCTGGGATGACATCGAGCGAAACCTCGATGATAAATTCAATACGCTAAACCAAGGCTACAGCGATGGGCTGCAGA GCGCTCATGACAGCTGGAATGGCTTCACTCGGCGCGTCAGTACCGCCGCGACTCAAGCATTCGGCTACATGGGCAGCAATCGCATCGATTCGGTGAAAGC AGCCATGAGGCTCTCCCGCGATATTGTCGAGTCAGACCTCAAGCGCAAGTGGGCGTCTATCGAGATCGAACAGATCCTCCCGGTACTGCTGCAACTGGTC AAAGAAGTGGCGATGATTCTGGGCGGCAGCGTTGCGGTCGGCACCATTGCTGGCGGCGTTGCCGGGTCGTTTTTCTTTGGCGTGGGCGCCGTGCCGGTAG CAGCAGCGGGGGCGGGTATCGGACTACAGGTTGGCAATCTGATCCTGTTGACGCTTGGCCTTGCATCTATCGCTGAGTATTTCTACCAAGGCCTACCCGC TTGCCTTGCAACCCTGCAGGAAGGCTTTGCTACCGCCTGGCATGCTGACGAAGGCCTGAAACCCGAGGGCCTCGACCCTACCGGGGGTTCGGCATACGTA ATGCAGGAGCGCATTGATCGTGCGGCTCAGCAACTGGCAAAAGGTCAGGAACAACTCGTACTGCTGCTCTTCACCGCCATCGTGACGTACTGGACACGTG GACAGGTCAAGGCAGGCCTTATGGGCAGCATGGATAGCATCGCAGCGCGCAGTACCAAGCTTCAGGTAGAGATTTCGAACAAGCAGTTTGCGAATTGGTT GGCGCGTAATGAGCAGAAGTTGTTGGCTCAGCCGGAGTTGCGGGTTAATGAGCCGGTACAGTTTAGACAGGATTCGCCGGGGTTAGATAAGCCGTACGAA GAGTTTAAACCACAACCAGAGCCCGTGCCGCCGGACCTAGATTCTGGAAAGTTAGGGCAATCACGTCGCGAATACTTAAATGCAAAATTTGGGCGAACAG GCGACGTACTTAAAGATATTTCAATTCGAGAAAATAAAGAAACGGCTGAGAGTTATTTTAAATCTATCGGTTTCACAAAAGACCGCTATGATTCTTATCT GTCGGGTATAGACTTTACTAAATCAGTAAGAGTAGAAACAATTAATTCTGGCAAAAAGCTGTGGCAGTATCAGGTTCCTGGAGGCATTCAAGGTATGTGG TATTCTCCATCTCCAAAGGTGTTGCCTACAGAACTAGGGATTAACCCTCAAGGTCTGGTGTACAAGACTGACATCAAAATGACAAGGGTTTTGAATGTTT ATCAAACTACAGAGAAAGTAACGATGCTTCGGAGCACGGCGTCCCCAATACTTGATGATTTTTCAATACCTAGCGAGCCTTTCCAAACGCTTGGAAACGC AAGGCAAATGACTTCCAACCAAAAAGATTCATTTAAGTTAATTGGCACGGGTGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGAAATTTAATACTGCTATAGGGTTTATAGATTATGCTATCGATCTGACTAGAGAGCGGATAAAACGCAATCCTTCATTTCCTGTTTATGCCTCAGTTAT AAACCAGCTATTATACATAAAAGCTGTTTTTGATGGTGTTGAGAAGGATAAATCTAGACTTCATAAGCTTTCCATTGGAGCTCTTGCGGCGAAAGAGTTT GAAGATACTGATTACGAGTTGGCACGAGCATTAATGGATGTTTATTACATAGCAAATCAATCAGCGAACGGACTGAAAGTTAAGCTTCCCGAAGGGTTGT GGCGTCCTTGAGAAATAAATTTTATTACGCTTGCCAAGAGCGAAAAGGTTGTAGTTTTCGCTCTTGAGGCCGGTCGCAGATGTCTGCTTTCCTTCGTCCC TCCGTCCCTCCGGCTGCTGCCAAAGACATTATTATGAATGCTGAACATCTTAAGCAAAAAACGCAAAAGCTGCGTGAAGTGATTGAAGATTTGAAAAAAT
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| Amino Acid Sequence |
>hypothetical protein
MDLLANVPSWDDIERNLDDKFNTLNQGYSDGLQSAHDSWNGFTRRVSTAATQAFGYMGSNRIDSVKAAMRLSRDIVESDLKRKWASIEIEQILPVLLQLV KEVAMILGGSVAVGTIAGGVAGSFFFGVGAVPVAAAGAGIGLQVGNLILLTLGLASIAEYFYQGLPACLATLQEGFATAWHADEGLKPEGLDPTGGSAYV MQERIDRAAQQLAKGQEQLVLLLFTAIVTYWTRGQVKAGLMGSMDSIAARSTKLQVEISNKQFANWLARNEQKLLAQPELRVNEPVQFRQDSPGLDKPYE EFKPQPEPVPPDLDSGKLGQSRREYLNAKFGRTGDVLKDISIRENKETAESYFKSIGFTKDRYDSYLSGIDFTKSVRVETINSGKKLWQYQVPGGIQGMW YSPSPKVLPTELGINPQGLVYKTDIKMTRVLNVYQTTEKVTMLRSTASPILDDFSIPSEPFQTLGNARQMTSNQKDSFKLIGTGE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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