Pseudomonas syringae pv. syringae HS191, PSYRH_RS24835

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. syringae HS191, complete genome. [Details]
DNA Sequence Upstream of Gene
TGTTGTCACAAAGCGGGCAGACCATTCGCATCACCAGTCCGGTGCGTTGGGTGGTGGGCTTCAACTCGTTCGATCTGGCGCAGTTTCGCAAGGTCATCAA AGACCCGAATCGCAGCAGCGCCGAGCTGTATCGCTACGTTGTGCATTATCTGGTGCTGTTCTACTGCCTGAGCAAGTCGCCGGGCATGAGCAGGCTGTTC GAAGGGCTGCGCTTCCCGGTCAGTTTCGAGCGATTGAAAGACTTCGGCGACCTGCCGTTCTGCGTGATCAGCTCACCGGTGCGCTCAGAATTGCCGGATG AATCGGTGATTCGCAACAGCACGCAGATCGCAGGCAATACCAGTTTCGAAGAATTGGTCGGACACGAAAACATTCTGGAAATGAACGATGAAATCCGTCA GCGTCTGCTGCTGACGATTGAAGGACTCTAATCGCGCCCGGCCTGCCACAGGCCCGGTACGCAAACGACTTGCAGCGAGTTGCTCGCACAGGAGATGACG
DNA Sequence for Gene
>PSYRH_RS24835
ATGGCGAAGAAGGAAAGTACCCAGCACAAACTTGACCGCGTTCGCGCGCCTCGGGTCCATATCACTTACGACGTGGAGATTGGCGATGCTCAGGAAAAGA AAGAGCTGCCATTCGTTGTGGGCGTTATGGGCGATTTCTCCGGCAACCCGCTGGAGCCGCTGCCCAAGCTCAAGGATCGCAAGTTCATCTTCATCGACCG CGACAATTTCAATGGCGTCCTGAAAGGCATCAAGCCGCGCCTGGCGTATCGCGTCGACAACACCCTGGCAAAAGACGGCACCCAACTCGGTGTCGAGCTG AACTTCAATGCGCTGGAAGACTTCGAGCCGCAGAACGTCGTGCGTCAGGTCGAGCCGCTGCGCAAGCTGCTGGAAGTGCGCAACAAGCTGGCTGACCTGC GTAACAAGATGGGTGGCAACGACAAGCTTGAAGAACTGCTGATGGACGTGTTGCAGAACACTGAAAAGCTGAAAACCCTGGGCAAGGAGTTCGGCCGTGA AGCCGCCGTTCCTGCCACCGACAGCAAAGAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGGAGCCTGACGATGACCGATAAGCAACCCGTGACTCAGCAGGACAGCGCTCTGGTTGAAGTTGAAAACTTCGCCCCGCAATCTTCCCTGCTCGACAG CATCATTTCCGAAAGCCGCGTTGCACGCTCCGAAACCGAGCGCACCCGTACCCGCGATCTGATCGGCGAACTGGTGGCCCAGGTACTTGAAGGCGAAATG ACGCCAAGCAAGGACCTGATTGCCGTGCTCGACGCGCGCATCGCCGAGATCGATTCGATGCTCTCCGAGCAAATGAACGAAATCATGCACGCCAGTGAGT TTCAGCAACTGGAAGCGTCCTGGCGCGGCCTGAAGTATCAGGTTGACCAGACCGAGACCAGCACCACGCTGAAGATTCACCTGCTCAACGCGTCGAAAAA AGACCTCGTGCGAGACCTCAAGGCGTCGTCCGAATTCGACCAGAGCGCACTGTTCAAGAAGATCTACGAAGAAGAGTACGGCACCTTCGGTGGTGCGCCG
Amino Acid Sequence
>type VI secretion protein
MAKKESTQHKLDRVRAPRVHITYDVEIGDAQEKKELPFVVGVMGDFSGNPLEPLPKLKDRKFIFIDRDNFNGVLKGIKPRLAYRVDNTLAKDGTQLGVEL NFNALEDFEPQNVVRQVEPLRKLLEVRNKLADLRNKMGGNDKLEELLMDVLQNTEKLKTLGKEFGREAAVPATDSKE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site