Pseudomonas syringae pv. syringae HS191, PSYRH_RS24470
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae HS191, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCTCCCTGAATTTCCCACAGGACAAGGTACTGACCCGTACCGCCGAACTGGAGAAATACAAGGACAAGACGTTGATCATAGTCGATGCAATGGGGCAGCA TGCTGGCACCACCGCCCGCGAGCTGCTCAAGTCCGGCTTCAAGGCGGCCAAGCTGTCCGGCGGCATTTCCAGCTGGCGCGGCGATAACCTTCCTCTGGTG AAGTGAACATGGCTCAAGTCATCGTCTATTCCAGCGACTACTGCCCGTATTGCATACGTGCCAAACAGCTTCTGCAGAGCAAGAGCGTGGCCTTCGAGGA AATCCGCGTCGACGGCAAGCCGCAGCTGCGTGCCGAAATGACCAAGAAGGCCGGTCGTACTTCCGTACCGCAAATCTGGATCGGCTCGACCCACGTGGGC GGCTGCGATGACCTGTTTGCTCTGGAGCGTGCCGGCAAGCTCGATGCGCTGCTGGCCTGATATCCCTTAATCTTTCAGCCTAATCTGACAAGGATCCGAG
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| DNA Sequence for Gene |
>PSYRH_RS24470
ATGACCGATCAACCGAACAACGACGCCGTTGCCAACGAAGAAAACGGCCCACAATTTTCCCTGCAGCGTATCTACGTTCGCGACCTGTCGTTCGAAGCGC CAAAAAGCCCGGCGATCTTCCGCCAGGAGTGGACGCCGACCGTCAGCCTGGACCTCAACACCCGTCAGAAGCAGTTGGAAGGCGATTTCTACGAAGTCGT GCTGACCCTGTCCGTGACCGTCAACAACGGCGATGAAGTTGCCTTCATCGTTGAAGTGCAACACAACGGCGATGAAGTTGCCTTCATCGTTGAAGTGCAA CAGGCCGGTATCTTCCTGATCAAGGGCCTGGACGACGGCGCAATGAGCCACACCCTCGGCGCATTCTGCCCGAACATCCTGTTCCCTTACGCTCGCGAAG CCATCGACAACCTGGTCGTACGTGGCTCGTTCCCTGCGCTGATGCTGGCTCCGGTGAACTTCGACGCCCTGTACGCGCAAGAACTGCAACGCATGCAGGA AGCTGGCGAAACGCCGACTGTTCAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGTTACCGCTGCAAAAAAAAGCGCCTTTCAGGGCGCTTTTTTGTGCTTGGCCGCTCGGTCTAGGCAAAACCGTGCTGACGCCATGCTTCATAGACAGCC ACGGCCACCGTGTTGGACAGGTTCAAGCTGCGGCAGCCTTCACGCATGGGCAGCCGCAGGCGATGCTCGCTGCTCAGCGAGTCGAGAATATCGGCGGGCA GGCCACGGCTCTCCGGACCGAACAGAAAGGCATCGCCTGGCTCAAAGCTCGCATCATGAAAAGGCCGCGAGCCTTTGGTGGTGAAGGCAAACAACCTCGG GTTGCCGATCTTCTCCAGGCAGCTTGCGAGGTCAGCATGTGTCTGCAGCGTGGCATACTCGTGATAATCGAGCCCGGCACGGCGCAGGCGCTTGTCGTCC AGCTCGAAACCCAAGGGTTCGATCAAATGCAGGGTGCAGCCACTGTTGGCGCATAGCCTGATGACATTGCCGGTATTCGGCGGAATTTCTGGTTGAAAAA
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| Amino Acid Sequence |
>preprotein translocase subunit SecB
MTDQPNNDAVANEENGPQFSLQRIYVRDLSFEAPKSPAIFRQEWTPTVSLDLNTRQKQLEGDFYEVVLTLSVTVNNGDEVAFIVEVQHNGDEVAFIVEVQ QAGIFLIKGLDDGAMSHTLGAFCPNILFPYAREAIDNLVVRGSFPALMLAPVNFDALYAQELQRMQEAGETPTVQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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