Pseudomonas syringae pv. syringae HS191, PSYRH_RS21610
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae HS191, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTTCACCGTTGGCCTGCAGCGTGCTCAGCAGACCATCCTGCGAGAACTGCTTCATCTTCAGCGCGTACTCGATGGCTTCGCCGTCGCCGCCCAGTTGTGG CGCGTTCTCTGTGCCAGTGATCGGCAGGACTTCGATGTAGAGGTCGTCGGTCAGACGTTGATTCAGGCGCAACTCTTCTTCGCAGAAATGCTTGCGCAGG GCCAGCGTGGTGAAATCCAGAAAGCCGAAGTTCATCGGCTTTTTGAATTTGTAGGCATACGGACCCGTCAGCAGCACCCAGGAAATGTGCGTTTCGATGA CCTGGAAACTCTCCACCGGATGGGGGAAGAGGGCAGGGTTCTGCAGGGCAGCAATCAAAGACTGGCTCACGGTCGATCCTTCAGGAATGTGTTCAAAATG TAAGTACACGATGCTGCCATTATGGCCGCTTGGCGCGAGGCTGCAAACCGCTGGCTCGGGCGTCTGTCGATCCTCGGTAAAGTGCGTATAATCCGCGCCC
|
|
| DNA Sequence for Gene |
>PSYRH_RS21610
ATGACTCGATCCCGCACCTCTCGTTCTGCAAAAAAACAACCTCCCCGCAGCCTTAACAAGTGGCTGGGCTGGGCGTTGAAGCTCGGTATTGTCGGCCTGG TTCTGCTCGGCGGCCTGGCCATTTATCTCGATGCAATCGTCCAGGAAAAATTCTCCGGCAAGCGCTGGACCATCCCGGCCAAGGTCTATGCACGGCCGCT GGAGCTGTTCGTTGGACAGAAGCTGAGCCGTGATGACTTTCTCATCGAACTGGACGCCTTGGGCTATCGCCGCGAAAGCGTGGCGAACGGCCCCGGTGCC GCAGCGGTGAACGGCAATACCGTCGACCTCAACACGCGTGGTTTTCAGTTCTACGAAGGCACTGACGCAGCGCAGCAGGTGCGCGTGCGCTTTTCCGGTG ACTACGTAGCTGACTTGTCTTCGGGCAATGGTGCAAAGCTTGCGGTGGCGCGGCTTGAGCCGTTGCTGATCGGCGGCTTGTACCCGAAGAACCTGGAAGA CCGGATTCTGATCAAGCTGGATCAGGCGCCGCCCTATCTGCTCGACGGGCTGGTAGCGGTCGAGGACCGGGATTTCTATCACCACTTCGGCGTGTCGCCC AAGTCCATTGCCCGGGCGATCTGGGTCAATACCTCGCAGGGGCAGATGCGCCAGGGCGGCAGTACGCTGACCCAGCAGTTGGTCAAGAACTTCTACCTGA CCAACGAACGCAGCCTGACCCGCAAGCTGACCGAAGCCATGATGGCCGTTTTGCTGGAGATCCATTACAGCAAGCAGGAAATCCTCGAGGCCTATCTCAA CGAAGTGTTCGTCGGGCAGGACGGCCAGCGTGCTGTTCACGGTTTCGGTCTGGCCAGTCAGTATTTCTTCAGCCAGCCGCTGTCCGAACTGAAAATCCAT CAGGTGGCGATGCTGGTCGGTCTGGTCAAAGGGCCGTCCTTCTACAACCCGCGTCGTAATCCGGAGCGTGCTCTGGAGCGTCGCAATCTGGTGCTCGATC TGTTCGAGCAGCAGGGCGTCGCCACGCCGGAAGTGGTTGCCGCTGCGAAGAAAATGCCGCTGGGTGTGACCAAGACCGGGACCCTCGCCGACAGCTCGTT CCCGGCGTTCCTCGATCTGGTCAAGCGTCAGCTGCGCGAAGACTATCGCGACGAAGACTTGACCGAAGAAGGGCTGCGGATCTTTACCAGTTTCGATCCG ATCCTGCAGATGAAGTCCCAGGCTGCCATGGACGATACCTTCAAGAAGCTCGCCGGGCGCAAGGGTTCTGATGAGGTGGAGTCGGCCATGGTTGTCACCA ACCCGGAAACCGGCGAAGTGCAGGCGTTGATCGGTGGGCGTGAGGCCGGGTTCTCGGGCTTCAACCGGGCGATCGACGCGGTTCGGCCGATCGGCTCGCT GGTCAAGCCGGCTATCTACCTGACGGCACTCGAACGGCCAAGTCAGTACACCTTGACCAGTTGGATCGCCGACGAACTGTTCCAGGTCAAGGGCGCCGAT GGCCAGATCTGGAAACCGCAGAACTACGATCACAAGTCACACGGCAATATCTTCCTGTATCAGGGGTTGGCGCATTCTTACAACCTGTCGACCGCCAAGC TGGGTCTTGAACTGGGCATTCCAAACGTGTTCAAGACGCTGGCCAAGCTGGGTGTGACGCGCGAATGGCCGACCTATCCGTCGATGCTGCTGGGTGCGGG TGGCCTGAGTCCGATGGAAGTGGCCACCATGTATCAGACCATCGCCAGCGGCGGGTTCAATACGCCGATGCGTGGTATTCGCAGCGTGCTCACCGCTGAA GGCGAGCCGCTCAAGCGTTATCCGTTCCAGATTGAACAGCGCTTCGATCCGGGTGCCATATATCTGGTACAGAATGCGATGCAGCGGGTCATGCGCGAAG GTACAGGCAAATCTGTTTACAACGTGTTGCCGAGCTCGTTGAATCTGGCGGGCAAGACCGGCACCAGTAACGACTCGCGCGACAGCTGGTTTGCCGGGTT CAGTCAGGACCTGCTGGCCGTTGTGTGGATGGGTCGCGACGACAACGGCAAGACACCGTTTACCGGTGCCACCGGTGCCCTGCAGGTCTGGACCAGTTTC ATGCGCAAGGCTGGTCCGCTGCCGCTGGACATGGCGATGCCAGACAACGTCGTTCAGGCGTGGGTCGATGCGCAGACCGGTCAGGGTTCGGATGCAAGCT GCCCGAATGCCGTGCAGATGCCGTATATTCGCGGCAGTGAGCCCCAGCCTGGCGCGACATGCGGCGGCGCTCCGGCACCTGCCACTGAGGTGATGGACTG GGTCAAGGGTTGGTTGAACTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCAATCGAGGTTTTGAAGTGAATAAATGGTGGATTCCAGCTTTAACGGCACTGGCCTTGCTGAACGGCTGCGCCAGTGTGGAACGCGGCTCGATTCCGGT CGTGGATTCGAGCTCCAAGGTGTCCAACGGCGAACGTGCGGCAGCTTCGCGTCGCACCAACACCGCTCCGGTGCAACAGCAGCCGCAAGCTGTACCGCAG GACTCGGGCGTGGTGGTGATGGTGCCGGGCGCGGGTGGCGCTGATGCAGGACAGAGTTATTCTGCGCCCGCCAGTCAGGCACCGTTCAGTGTCAACACTC CGCCTGTCGATGCCGCTCCTGTCAATCAGGCCCCGGTCAGTCAGGCTCCCGCGAACAACAGTTACAGCATGCCGGCCGCCTCTGCCCCGACCGGAATTCC GTCCAGCGGTGGCGGTCTGTCAGAGGACGAGCAACTTGACGGGCCTGTACTGGCATTGCTCACCACTGCACAGCAACAGCAGACCAGTGGCGATCTCAAC
|
|
| Amino Acid Sequence |
>peptidoglycan glycosyltransferase
MTRSRTSRSAKKQPPRSLNKWLGWALKLGIVGLVLLGGLAIYLDAIVQEKFSGKRWTIPAKVYARPLELFVGQKLSRDDFLIELDALGYRRESVANGPGA AAVNGNTVDLNTRGFQFYEGTDAAQQVRVRFSGDYVADLSSGNGAKLAVARLEPLLIGGLYPKNLEDRILIKLDQAPPYLLDGLVAVEDRDFYHHFGVSP KSIARAIWVNTSQGQMRQGGSTLTQQLVKNFYLTNERSLTRKLTEAMMAVLLEIHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQYFFSQPLSELKIH QVAMLVGLVKGPSFYNPRRNPERALERRNLVLDLFEQQGVATPEVVAAAKKMPLGVTKTGTLADSSFPAFLDLVKRQLREDYRDEDLTEEGLRIFTSFDP ILQMKSQAAMDDTFKKLAGRKGSDEVESAMVVTNPETGEVQALIGGREAGFSGFNRAIDAVRPIGSLVKPAIYLTALERPSQYTLTSWIADELFQVKGAD GQIWKPQNYDHKSHGNIFLYQGLAHSYNLSTAKLGLELGIPNVFKTLAKLGVTREWPTYPSMLLGAGGLSPMEVATMYQTIASGGFNTPMRGIRSVLTAE GEPLKRYPFQIEQRFDPGAIYLVQNAMQRVMREGTGKSVYNVLPSSLNLAGKTGTSNDSRDSWFAGFSQDLLAVVWMGRDDNGKTPFTGATGALQVWTSF MRKAGPLPLDMAMPDNVVQAWVDAQTGQGSDASCPNAVQMPYIRGSEPQPGATCGGAPAPATEVMDWVKGWLN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|