Pseudomonas syringae pv. syringae HS191, PSYRH_RS20555
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae HS191, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CAACAACCTGCGTCAGAACTCGCGTGCACTGGGTCTGGGCGTACGTCGCCTGGGGATTTTCACCAGCATCGTACTGTTCGACCAGCGTGTGTCGATGTGG ACCTCCATCCTCGGTCTGACCGTCGCACTGATCGCCAGCTTCAAGTATGGCGGCGCGTTCCTGTTGATGTATCTGCTGTGGATCGGCATGACCCGTCTGA TCCTCACCCTGCTGCTGTCCCTCTCGGGACACAGGATCGGGCCTGCCTACCCGATCATTCTCTATTACAACCAGATCGTCGGCGCGCTGATGAAGATCTA TGTCTTCTTCCGCCTGGACCGCCAGTCCTGGACTCGCCAGGACACCAAACTAAGCCGCGACATGGCCAGCTTTCAGGGCTGGTTCAACACGTGGTCGTCC CGAACCATGACTTTCTCGGCTGGCACCATCTTCGTCGCTGTGCTGTTGACGATGGTTTGACCGGGCCAACGGATTAATCGCTTAAGTAGGAAAAATAGCC
|
|
| DNA Sequence for Gene |
>PSYRH_RS20555
ATGAATACAGCCGTGAATGCGAACGTCGTACATGAATCCGAAGCCCAGCGCCAACACGCGCGGATCAAGATCCCTGCCAAGCTGCGCCTGCTGAATGATC AGCCCAACGCGCCACTGGTACGTGTCGAAGACCTGTCGGCCGGTGGCCTGAGCTTCGTTGCTCCGTCCGGGCAGAAATTCAGCGAAGGGCAGATCGTCAA GGGACGCCTGCAATTCATCATCGACAACCTTGGCCTGGCCATGGACGTCGATCTGCAGGTGCGCTCGATCGACAACGCCAGCAACCGCATCGGTTGCCAG TTCCAGAATCTGGAACCTCAGGACATCGCTACCCTGCGCCACCTGATCACCTCGCACCTGTCCGGCGAAGTCGTCACCCTGGGTGAAGTGCTGGCCACGC TGCAGCGCGATAACTTCACCAAGGCACGCAAGGTCAAGGGCAAGGACAGCGGCATGAGCGCCATGGGTCGCCTGCGCGCCGTGACCTTCAGCCTGGGCGT GTTCATTGTCGGTCTGGCCGCTTTCGGCTTCATCTTCAAGACGATCTACGGCCTGTACTTCGTCAGCCATGCATCGGCCGGTCTGGTCACCATTCCAAGC ATGGACGTGACCATGCCGCGTGAAGGTACCGTACAAAGCCTGGTCGCCCAGAATGGCGAAGCCGCCAAAGGCGCGCCACTGGCGTCCTTCAACACCAGCA TGCTGGAAATGCTCAAGGGCAGCCTGACCGGTGAAGACCTGCAGCCGGCCAAGATCGAAGAGCTGTATGGCAAGCAGATGAGCGGCACCATGACCAGCCC GTGCGATTGCGTCGTGGCTCGCCAACTGGTTGCCGACGGTCAGTTCGCGTCCAAGGGTCAGGTGATCTTCCAACTGGTGCCACGCAACGCGCCGGCCACG GTTGAAGCTCGCTTCACCTATCGCCAGTTCAACGACGTCAAGCCAGGCACACGTGTCAGCTTCCAGATCGCTGGCGAAGACAAACTGCGCACGGGTCAGA TCATCAGCAGCACCAACCTGAGCGACGCCGACCTGTCCACCGACATCCGCGTGCAGATCAAGCCTGACGAAAGCCTGAGCAGCTCGCTTGCCGGTCGCCC TGTCGAAGTGGTCAGCGATCGCGGCCCGTCCGTGAACTGGCTGATCGATAAAGCAATGGCTGCGGGTCTGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCATGAACAGCCCACTACGACGCCTGTCGACCCCCACGCTACTGAGCCTCGCCGTCGCGCTCGGCCTGAGCGGCTGTGCCGGCCTGCCTGATCAACGCCT TGCCAATGAAGCCCTGAAAAACGGCGACACTGCATTGGCGGAGCAGAACTATCGGCAGCTGGCGGACCTGGGCTACAGCGACGCGCAAGTCGGCCTGGCT GATATTCAGGTCGCGACTCGCGACCCGGCTCAGCTCAAGCAGGCCGAGGCTACCTACCGCGCTGCCGCGCAGACCTCCCCCCGGGCGCAGTCGCGCCTGG GCCGTCTGCTGGCTGCCAAGCCCGACGCTACCGAAGCCGAACATCGCGAAGCCGAAGGCCTGCTGAAAAAGGCCTTCGCCAATGGCGAATCCGGCACGCT GATCCCGCTGGCGATGCTGTATCTGCAATACCCGCACACCTTCCCTGAAGTGAATGCGCAGCAGAAGATCAGTGAGTGGCGCGCTGCCGGTTATCCGGAG
|
|
| Amino Acid Sequence |
>hemolysin D
MNTAVNANVVHESEAQRQHARIKIPAKLRLLNDQPNAPLVRVEDLSAGGLSFVAPSGQKFSEGQIVKGRLQFIIDNLGLAMDVDLQVRSIDNASNRIGCQ FQNLEPQDIATLRHLITSHLSGEVVTLGEVLATLQRDNFTKARKVKGKDSGMSAMGRLRAVTFSLGVFIVGLAAFGFIFKTIYGLYFVSHASAGLVTIPS MDVTMPREGTVQSLVAQNGEAAKGAPLASFNTSMLEMLKGSLTGEDLQPAKIEELYGKQMSGTMTSPCDCVVARQLVADGQFASKGQVIFQLVPRNAPAT VEARFTYRQFNDVKPGTRVSFQIAGEDKLRTGQIISSTNLSDADLSTDIRVQIKPDESLSSSLAGRPVEVVSDRGPSVNWLIDKAMAAGL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|