Pseudomonas syringae pv. syringae HS191, PSYRH_RS19180
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae HS191, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCCAGGAGCTGGCGGATCGGGTGCGTGAGCCGACGTTCGACATCGGCACGCTGCAAACCATGACTCAGGCTAATCCGCAACAGATGCAACGGTTGCTGG GCGAGTTATGGAAGAATCTGAGGCACGAATACGCTTTGCTGGAGCCTGCGGTGTCGGCCAATGACTGGAAGATGCTGAGCGCCTGTCTGCATCGCCTCAA GGGGGCGGCGAGCCTGGTTGACGCAGTGCCGCTTGCCAAGGCGTGTGCCGCGCTGGACGACAGTGTCCGGCTGCAGAGCACGGCCAGTCTGGCGGAACGC TGGCAGGCACTGGAGGTAGCCATGACCCGTCTGCGCGCTGATATCGAAGTGCAACTGGTGGTCGTGCCGGAGACTGCGGTGCCAGGCGGTTGAATCTTGC GAACAACGTGTGGCGGGTTTAGGACATGTCCTATGGGGCGGGTGTCCGGGACCCGCTACAGTAAGTGTTATCCCGGGCCGCTGGCTCTGACTCCGCAGGC
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| DNA Sequence for Gene |
>PSYRH_RS19180
GTGATCGTGCACTCACTCAAGGTTCTGATTCTCGAGGATCATCCCTTCCAGCTGATGGCTCTGCATCAGATGCTCAACGCCAATCAGGTGTTCGATGTGC TGACGGCCGATAGCGTGGAAGTCGCCAGGCTTTCCCTGCAAAGCCGTGGTCCGGTCGACATCGCGATCTGCGACTTGCAGATGGAAGGGCCTGACGGCCT GGAATTGATCCGCTTCATGGCTGAGAACGGTTTGGCGCGTGCGCTGATCATCGTCAGCTGTTCCGCCGCCTGCGTGCTGGAAGGGGCCGCGCAACTGGCG CTCGCCCAAGGCCTGAACGTTCTGGGGTATGTGCAGAAACCTGCGTCCGCCGGGGCGTTGTACGAGTTGCTTGAGGCGTATGGGCCCGGTCGGACAGACT GTGTAGAGCAGGCCCCGACGGGCAGCGCGTTCAGAGCTCTTTCCGCCATCGAATTGTTTGACCCGACGCGCAGCGGACCGATAGACGTGGCGTCCATTGC CGAACAATGGATCACCTATTTTCAACCCAAGGTCAGTCTGCAGGGCGAGTTGCTGGGTGCCGAAGCGCTGGTTCGCTGGCAGCACCCCGTGTATGGGCTG CTGGCACCCGGGCGATTCATCGACGTCATCGAGGCTGAAGGGCTGACCGTTGCATTGACCTGGCGGGTCCTGGATCAGGCCCTGCAGTTCTCTGCGCAGG TCATGCGCGAGCGGGGTGAGCCGCTGTCGGTTGCCGTCAACATTGACCCGCAAGTGCTGCAGCAGCTGGATTTCGCCGAGCAGATCATGCAAGCGCTTGC CCGGCATGGCGTACCGGCCACCGCGCTGACCCTGGAAATCCTCGAGCAGGACGCCGCGCGCCCGGAAACCTGGCAGCTCGAAGGCCTGCTGAGGTTATGC ATGCAGGGTTGCAAGTTGTCTATCGATGACTTTGGCATGGGCGCTTCGAACATCGACCGCCTTCTGCAATTACCTTTCAGCGAGCTGAAAATACCAACCG AGTTCGTGCGCGGCATGGCCGACGACGCGCGTAAATCGGCGGTGGTCGCCGGTGCTTTGTTCATGGCGCAGCGGCTGTCGATGTCGGTGGTGGTTGAAGG TGTCGAGACGATTGAAGACGTTGACAGTCTGCTGGCGCTGGGCGATCCCGCCATTCAGGGGTATTTCATTGCCCGCCCGATGCCGGCCTCGGCCTTCATG CGCTGGGTGACGGAGCGTGACAGCGGCCATCTGCAAGCTGTTTCCAGAGACAACCCGCCTCAGGACAGACCGCTTTCCTGCAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATGAACAGAGCAGCGTCATTGGCCAGTCCGAGCTTGCGCATGGCGGCGACCTTCTGGGCGCTGACGGTCTGTTTGCTGCGATTGAGTTGCGCCGCGATCT GCCCCACCGTGTGGCCAGCCGAGAGCAGGCGTAACACTTCCAGCTCCCTTGGCGACAAGCGATCTGCCGGCAGCAGCGCGTCGGGCCCATGCTGACGGGC TTCTCTGAGTACCCTGCGTACCGAATCGGCGACAAAAAGCCCACCGCGCCTGACCCCCTTGATGGCAGCAGGCAGTTCTCCGGCAAGGCTGGCCTTGCTC AACAAACCCCGGACACCCAGGTCCAGCATGGACTGAAACAGTCCGGCATTGCTCAGGGTGGTGACAACGATCACTGGCAGCGCCGGGAAATCCCGGCGAA TACGTTGCAGCAGACGCAGGCCGTCGTTCTGCCGTTCGACGGGCATCATGAAGTCGGTCACCAGCACATCGCAGGCGTGGCGTTCGAGTGCCTGGAGCAG
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| Amino Acid Sequence |
>histidine kinase
MIVHSLKVLILEDHPFQLMALHQMLNANQVFDVLTADSVEVARLSLQSRGPVDIAICDLQMEGPDGLELIRFMAENGLARALIIVSCSAACVLEGAAQLA LAQGLNVLGYVQKPASAGALYELLEAYGPGRTDCVEQAPTGSAFRALSAIELFDPTRSGPIDVASIAEQWITYFQPKVSLQGELLGAEALVRWQHPVYGL LAPGRFIDVIEAEGLTVALTWRVLDQALQFSAQVMRERGEPLSVAVNIDPQVLQQLDFAEQIMQALARHGVPATALTLEILEQDAARPETWQLEGLLRLC MQGCKLSIDDFGMGASNIDRLLQLPFSELKIPTEFVRGMADDARKSAVVAGALFMAQRLSMSVVVEGVETIEDVDSLLALGDPAIQGYFIARPMPASAFM RWVTERDSGHLQAVSRDNPPQDRPLSCK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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