Pseudomonas syringae pv. syringae HS191, PSYRH_RS15640

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. syringae HS191, complete genome. [Details]
DNA Sequence Upstream of Gene
AGGAGGTGATGCTTAAAGTGTTGTATGGGTTGAAAAATTTTGAAGGTAAATCTAAATTTAAAACCTGGCTGTACAGCATCACCTACAATGAATGCATCAC GCAGTACAGGAAGGAACGGCGTAAGCGTCGCTTGATGGACGCGCTGAGTCTGGATCCACTTGAGGAAGCGTCGGAAGAAAAGGCGCCCAAACCTGAAGAA CGGGGCGGACTTGATCGCTGGCTTGTGTATGTGAACCCGATCGATCGGGAGATTCTGGTGCTGCGTTTTGTTGCAGAACTTGAATTCCAGGAGATCGCTG ACATCATGCACATGGGCTTGAGCGCAACGAAAATGCGTTACAAGCGGGCTTTAGATAAATTACGAGAGAAATTTGCGGGAATCGCCGAAACTTAATACGG TGCAAATATCTCTAACAAACTGGCAAGGTCTGGTAGACTTGCCGCTGAGTTGTCCCCCTGTGTGGGACTGCTTAATAATCATCAGATGGGGATTTAACGG
DNA Sequence for Gene
>PSYRH_RS15640
ATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTACTATTGTTGCCGCAACTTCGTTCGGCGCGCTGGCTCAAGGCCAAGGCGCGGTCGAAATCGAAG GCTTCGCCAAGAAAGAGTACTACGACAGCGATCGTAACTTCAAAAACGACGGCAACCTGTTCGGCGGCTCCGTTGGCTACTTCCTGACTGACGATGTTGA GCTGCGTCTGGGCTACGACGAAGTCCACAACGTCCGTAGCGACAGCGGCAAGAACATCAAGGGCGCAGACACTGCTCTGGACGCTCTGTACCACTTCAAC AACCCAGGCGACATGCTGCGTCCATACGTATCTGCCGGTTTCTCTGACCAGAGCATCGGTCAAGACGCTCGCCGTGGCCGTGACGGTTCCACCTTCGCCA ACATCGGCGGCGGCGCCAAGTTGTACTTCACTGACAACTTCTATGCCCGTGCAGGCGTTGAAGCTCAGTACAACATCGACCAAGGCAACACCGAGTGGGC GCCTAGCGTCGGTATCGGTGTAAACTTCGGTGGCGGCAGCAAGAAAGTTGAAGCAGCACCAGCTCCAGTAGCTGAAGTGTGCTCCGACAGCGACAACGAC GGCGTGTGCGACAACGTCGACAAGTGCCCGGACACCCCAGCCAACGTTACCGTTGACGCTGATGGCTGCCCAGCAGTTGCCGAAGTGGTTCGTGTTGAGC TGGACGTGAAGTTCGATTTCGACAAATCCGTAGTCAAGCCTAACAGCTACGGCGACATCAAGAACCTCGCTGACTTCATGCAGCAGTACCCACAGACCAC CACCACTGTTGAAGGTCACACTGACTCCGTCGGTCCTGACGCTTACAACCAAAAACTGTCCGAGCGTCGTGCAAACGCCGTTAAACAGGTTCTGGTTAAC CAGTACGGTGTTGGCGCTAGCCGCGTAAACTCGGTTGGTTACGGCGAAAGCAAGCCAGTTGCTGATAACGCAACTGAAGCTGGCCGCGCAGTTAACCGTC GCGTAGAAGCAGAAGTAGAAGCTCAAGCTAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTAGCCGCTTGTACTGAAAAGCCCGGCTTAGGCCGGGCTTTTCTTTGCCTGCGATTTGGCATTGCGTCTGTTCAGGCGGGCTTGATGTCAGCCGGCATTT AGCTGTGCGTGGCCCATCAGCGTTTGATTCAGCAGCTCATTGCTGTACGCGGCAACCGCGCCGATCACCAGAATGGCGGGGCTCTTTAATTGGAAAGCGG CTGCGTCCTGTTGCATGTCATTCAGGGAGCTGCGGCATTCGCGCTGCCACGGCAGCGAAGCGTTCTCGATCATCGCCACCGGCATCTCGCCACTCATTCC GCCTGCCAGCAGGCTCTCGCGAATTTCCGCCAGTTTCGCCACGCCCATGTAAACCACCAGGGTGGTTCCGCCTTGCGCGAGCGCCTGCCAGTTGAGGGTG CTGTCGTCCTGAGTGTGAGCGGTGACCAGCGTCACGCCACGGCTAATACCACGCAGGGTCAGCGAAATGCCGCATTGTGTTGCACCGGCAAGACCCGCTG
Amino Acid Sequence
>thrombospondin type 3 repeat-containing OmpA/MotB protein
MKLKNTLGLAIGTIVAATSFGALAQGQGAVEIEGFAKKEYYDSDRNFKNDGNLFGGSVGYFLTDDVELRLGYDEVHNVRSDSGKNIKGADTALDALYHFN NPGDMLRPYVSAGFSDQSIGQDARRGRDGSTFANIGGGAKLYFTDNFYARAGVEAQYNIDQGNTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDND GVCDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLVN QYGVGASRVNSVGYGESKPVADNATEAGRAVNRRVEAEVEAQAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site