Pseudomonas syringae pv. syringae HS191, PSYRH_RS10160
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae HS191, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTTGCGGTATAGAACGCCGGAATGCCTGCGCCACCGGCACGCAGTTTTTCCGCCAGGGTGCCTTGTGGCGTGAGTTCGACTTCCAGCTCGCCGCTGAGCA GCTGCTTTTCGAACAAGGCATTCTCGCCGACGTAGGACGAAATCATTTTGCGGATCTGTCGGTCTTCAAGCAGGATGCCGAGTCCGAAGCCGTCAACGCC GCAGTTGTTGGAGACTACGGTCAGGCCCTTGATACCCATGCGCTTGATCTGCGCGATCAGGTTTTCCGGGATGCCGCACAGGCCGAAGCCGCCGCAGAGT ACCGTCATGTCGTCGGTCAGCCCGGCGAGGGCTTCTTCGTAGGTCGCTACTCGTTTATCGAGTCCAGCCATGATGATCCGCCTTTTATAGTTGTTGACCG ACAGTCGCGCTGTCGGAGGATCGGGTGACCTGCATCTTCTCTCGATGGGACTGATTTGTTAATTTTGTTTTTCTGATCAATTCATAAGAAAAGCAAATAT
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| DNA Sequence for Gene |
>PSYRH_RS10160
ATGAACGTCAAGCAGCTTCGCGCTTTTCTGGCCGTCGCGCAGTACCTGAGTTTCGCTCAGGCCGGCGAGCGTCTTAACGTGTCGCAACCGGCCTTGAGCC TGACGATCAAGAGTCTCGAAGAGGACCTTGGCGGACAGCTGTTGACGCGCACCACGCGCAACGTCGGTCTGACGCCCGAGGGCGAAACCTTGTTGCCGCT GGCGCGCCAGTTGCTGGCCGACTGGGACAACACCGAAGAACTGCTGCGTCAGCGTTTTACTTTGCAAATGGGCAGGGTGTCGGTCGCCGCCATGCCGTCA TTTGCCGGCAATCTGCTGCCAGCGGCCTTGAAGGTGTTTCGTGGGCGCTACCCGCGCGTCAATGTCGCGGTGCATGACGTGATCAATGAGCAAGTGCTGG AAATGGTTCGCCATCGCCGTGTCGAATTGGGTATCGGCTTTGAGCCCGAGTCGAACAGTGCCCTGTCGTTTATCCCGTTCTATATGGACCGCTTCGTCGC CGTGGTGCCCCGGGAGTCGCCGCTGGCCGAGCGGCGTGAGGTCACCTGGGAAGAACTGCTGCGTGAAGACTTCATCGCCCTGCAACGCCCGTCGGCGGTA CGTTTGCTGCTGGAACAGGCTATCGAGCCGCGCCACGGCAAGCTGGCGGTCGCGTTCGAGAGCCATCAGTTGTCGACCATCGGGCGCATGGTTGCCAATG GCCTGGGCGTCAGCGCGGTACCGTCACTGTGCATCGGGCAGATGCAGGAACTGGGGGCCTGCTGCGTGGCGCTGGTGGAGCCGCTGATCGAACGGCGTAT CGGCCTGATGATGCTTGCCGATCACAAGCTTTCAACTGCGGCTCAAGCGTTGCGCGAGGTGTTGATCGAGAATGCTCGCAACAGTCGATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGACTATCACGGCGGATGATTTTTGCTGCGCCAGGGGCAGGCGTAACCTTGCTTCATTCCTGAAATGAAGCCCGACCGGAGGCCCCCGATGAACCGTATG CTCGCCCTTGCGCTTGTCCTGACATTCACTGTTGCGCTGGTTTCCGGCTGCTCCACTCACCACGCTGTCGAGCAGCGGGCGTTCAGCGCTGAAGAAAGCC ATCAGTTGGCTCTTGAAGACCTCAACCGTCGAGGCCTGTCATTTGATGAGTATCAGGCACGCAAGGCGCAATTGATGGCGGATCCGCAGATCCAGCAGGC GCGGGACTTCGATGAAAAAGGCGAAACAAGCGTCGATCTGGGTGTCACGGGTCAGCAGCCACAAGGTTAACAGTCGGCTTGAAAAGTGCGTTGTGTAAGA ACTGTACTGCTGTAATTGGCCGTCAACTGTCCGTGTGTTTCCTGCACCGCCTTCGATAGGGTGAGCACCTGACTCACTGATCCGGACAGGCAGCATGTTT
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MNVKQLRAFLAVAQYLSFAQAGERLNVSQPALSLTIKSLEEDLGGQLLTRTTRNVGLTPEGETLLPLARQLLADWDNTEELLRQRFTLQMGRVSVAAMPS FAGNLLPAALKVFRGRYPRVNVAVHDVINEQVLEMVRHRRVELGIGFEPESNSALSFIPFYMDRFVAVVPRESPLAERREVTWEELLREDFIALQRPSAV RLLLEQAIEPRHGKLAVAFESHQLSTIGRMVANGLGVSAVPSLCIGQMQELGACCVALVEPLIERRIGLMMLADHKLSTAAQALREVLIENARNSR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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