Strain | Pseudomonas syringae pv. syringae HS191, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CTCCTCAAGCTCGCTGCGGCTGCTGTCTCACGCCTGCAAAGCCATCAACTGGGCGGGCTGGAACAAACGCGCACCAACGCCGACGGCACCCAGGTGACCA CCTGGCAGCTGGAAGTGCCGATGCGCAACGCCCACGACATCGTGCCCTTGCAGGTCAAGGTGCAGCGTGAAGACACGCCCGATCAGGACGCGGCCGAAGA CCGTGATGATATCGAGATCAAGGACACCCGGGAAAAGCTCTGGAAAGTCGACCTGGCGTTCGATCTCGAGCCATTGGGGCCCTTGCAGGTGCATGCACAG TTACTGCGCGGCACGCTGTCCAGCCAGCTGTGGGCCGAGCGCCCCGACAGTGCGGCATTGATCGAACATGAGCTGGGGTATCTGCGCGAACGGCTGATAG CCTGCGGCCTGGCAGTGGGCGAACTGGCCTGCAGTCACGGCGCACCACCAAGCGGTCCGCGTACCGCGCTCGAACAACGCTGGATCGACGAGAACGCCTG
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DNA Sequence for Gene |
>PSYRH_RS09365
ATGAGCCTACCCGAACACACTCCGCGCCAGGCTATCGCCCTCAGCTATGACGGCCAGCACGCCCCGACGCTCAGCGCCAAGGGCGACGACCAGTTGGCCG AGGCGATTCTGGCCATTGCCCGCGAATACGAAGTGCCCATCTATGAGAACGCTGAACTGGTCAAGCTGTTGGCCCGCATGGAATTGGGCGACAGTATCCC CGAGCCGCTGTACCGCACGATTGCCGAAATCATCGCGTTCGCCTGGCACCTGAAAGGCAAGTTTCCGGCTGGTCAGGACCCGAACGCGCCACCTGTCGAG CGCGATATTACGCCGCGCTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CTGCAGAAGCGCTGGCCGGTATCACATTGCAATCGGCTTGCGCCCTGCAAACGAATGCGCCAGCGTGCCGCCGTCGACCAGGTCCAGCTCGCCACCCAGA GGAACGCCGTGGGCAATGCGCGATGCGACCAAGCCCTTGTCATGCAGCAACTGGGCGATGTAATGCGCGGTCGCTTCGCCTTCCACCGTTGGATTGGTCG CGAGGATCACCTCGGTGAAGGTGCCCTGCTGGCTGACGCGTTCCATCAATTGCGGAATGCCAATGGCCTCCGGTCCCAGGCCGTCGAGCGGCGACAGGTG CCCCTTGAGCACGAAGTAACGACCGCGATAGCCGGTCTGCTCCACCGCATAGACATCCGTCGGGCCTTCGACCACGCACAGCAGCGTGTCATCGCGACGC GGGTCTGCGCATTGCGGGCAGAGTTCCTCTTCGGTCAGCGTGCGGCACGAGCGGCAGTGACCCACGCCATCCATAGCCTGCCCCAGTGCCTGCGCCAGCC
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Amino Acid Sequence |
>FlhB domain-containing protein
MSLPEHTPRQAIALSYDGQHAPTLSAKGDDQLAEAILAIAREYEVPIYENAELVKLLARMELGDSIPEPLYRTIAEIIAFAWHLKGKFPAGQDPNAPPVE RDITPRY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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