Pseudomonas syringae pv. syringae HS191, PSYRH_RS08355
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae HS191, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TATGCCTGGCGCGCTGGAAGGCGCTCGCGCGATTCAGCAGGAACTGGGTGACAGCGGCAATGCGCCTGCGCGTCCGCACTTTGCCGACTTCATGGTGCGC TCGGGTTTCGTCAAGGATCGCGCCGAGGCATTTCGCAAATGGCTGGGGGCGGGCAAACTGGGTGATGTGAAGCAGCACTGGCCAACGCTGGAGGACACGG TCGCCACCTTGCGGGCGTCGGGTGCATGGGTCAGTCTCGCGCATCCTTCACATTATGACTTTACCCGCAGTAAACGGCGTAAACTGGTCGGCGATTTCGT CCAGGCCGGTGGGCACGCCATAGAAGTGGTCAATGGCATGCAGCCTGCCGATCAGGTCGGCACCCTGGCCATCCTTGCACGCGAGTTCGGTTTGCTGGTT TCTGCCGGCAGCGACTTCCACGGTCCTGGCGCCTGGGGCGAGATCGGCACTTATCGTCCCGTGCCTGAAGATCTACCGCCTTTGTGGTGCAGATTCAAAC
|
|
| DNA Sequence for Gene |
>PSYRH_RS08355
ATGAACAGCCTACTGCCTCCGTCTGAACAGGAAGTAATCGTGAGTCAATTTTTCCAGGTCCATCCGGAAAACCCGCAGCCGCGCCTGATCAAACAGGCCG CTGAAATCATCAAGGCCGGCGGGCTGGTGGTGTACCCGACCGATTCGTCCTATGCATTGGGTTGCCAGATCGGTGACAAGAGCGCCATCGAGCGTATCCG CCGCCTGCGCCAGCTGGACGACAAGCACAACTTCACCCTGATGTGCTGCGACCTGTCGCAACTGGGGCTGTTTGCCAAGGTCGACACCGGCGCGTTCCGT GCGCTGAAGGCGCACACGCCCGGGCCGTACACCTTCATTCTCAACGCCACCCGCGAGGTACCGCGTCTGGTGCTGCATCCCAAGCGCCGCACCATCGGCC TGCGTGTGCCAAGCCATCCCATCGCCCAGGCCCTGCTGGAGCAATTGGGTGAGCCGCTGATGAGCGTCAGCCTGATCATGCCGGGCGACAGCGTGCCGCT CAGCGATCCCTACGAGATGCGCCAGATTCTCGAGCATCAGGTCGATCTGATCATCGATGGCGGGATCGGCGGTATTTCGGCGTCCACGGTCATTAACCTG GCTGAGGGTGAACCCCAGATCGTTCGGGTCGGCTGTGGTGATCCGACGCCTTTCGGTGAACGCGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGACAGCCGTCGAGGCAGTCGACAGCCAGGCCGACGCCCAGCAAGAGCTGCCGTTTGCGCTGGTCTACGGGCGTGCTGTCACGCAGATGCCGCTGGACCT GTACATCCCGCCCGATGCGCTGGAGGTTTTTCTCGAAGCGTTCGAAGGGCCGCTCGACCTGCTGCTGTACCTGATCCGCAAACAGAACATCGACATCCTC GATATTCCCGTGGCCGAGATCACCAAGCAGTACATGGGGTACGTCGAGCTGATGAAAACCGTGCGCCTGGAGCTGGCTGCCGAGTATCTCGTCATGGCCG CCATGCTGGCCGAGATCAAGTCGCGCATGCTGTTGCCGCGTTCGGCGGAGGTCGAAGAGGAAGAGGGTGATCCGCGCGCCGAGCTGATTCGCCGCTTGCA GGAATACGAGCGCTTCAAGGCCGCCGCCGAGGGCATCGATGGCCTGAGCCGTGTAGGCCGCGATGTCATCGTGCCGAAACTGGACGCTCCCGAAGCCCGC
|
|
| Amino Acid Sequence |
>Sua5/YciO/YrdC/YwlC
MNSLLPPSEQEVIVSQFFQVHPENPQPRLIKQAAEIIKAGGLVVYPTDSSYALGCQIGDKSAIERIRRLRQLDDKHNFTLMCCDLSQLGLFAKVDTGAFR ALKAHTPGPYTFILNATREVPRLVLHPKRRTIGLRVPSHPIAQALLEQLGEPLMSVSLIMPGDSVPLSDPYEMRQILEHQVDLIIDGGIGGISASTVINL AEGEPQIVRVGCGDPTPFGERA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|