Pseudomonas syringae pv. syringae HS191, PSYRH_RS06670
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae HS191, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TTACCTGTGCGATCAGGAATGGGCCACCAGCATCGAAGACATCCTGTGGCGCCGCACCAAGCTGGGCCTGTTCACGACGCCTGAGGAACAGGCCGCCGTG AGCAGCTACCTGGAAACCGTCGTGCGCAACAAAGCCTCTTTCGAAGCCGCCTGATAATCTGCTCGCAACCTGTTCACCCATCGTGCGGTGAACAGGTTTC CCTCCTTACTGCCCTCCTCCCGCCCCCCCTTTCCATTCGGTTTTCCGAACAATCGCCCCCGCTTTATTCGGCTTCCCGGACGCATTTGTCCGTAGCATCA GAGCCGATCTAAAAAAACCCTTTTAAATTCAGCGTGTTGAATTCCAAAAACGGTCTGGCACGACTCATGCTCTACATTCTGAACCGAGCGTTTCGACAAG AGCGTGTGTCTGGATGTGGACGCCGTTGAAGCATTCGCCAACAAGCGGGCCGACTCTGATTGCGGCCCCATCAATAAAAAATGACATCAAGGACTCACCC
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| DNA Sequence for Gene |
>PSYRH_RS06670
ATGCGCATCGTTCCCCACCTGTTGGGCGCAGCCATCGCTGCCGCTCTGATCAGCACGCCGGTTTTCGCCGCCGAACTCACTGGCACTCTGAAGAAGATCA AGGAATCCGGCACCATTACGCTGGGCCATCGTGACGCCTCCATCCCGTTTTCCTACATCGCTGATGCCTCTGGCGTGCCGATGGGCTACTCCCACGACAT CCAGCTGAAAATCGTCGAAGCCATCAAAAAAGACCTGGACATGCCTGACCTCAAGGTCAAGTACAACCTGGTGACTTCGCAGACCCGTATCCCGCTGGTT CAGAACGGCACCGTCGATGTGGAATGTGGCTCGACAACCAACAATGTCGAGCGCCAGCAGCAAGTCGATTTCTCCATCGGCATCTTCGAAGTCGGCACGC GCCTGCTGTCGAAAAAGGATTCCAGCTATAAGGATTTCGACGACCTGAAAGGCAAGAACGTCGTCACCACGGCGGGCACCACGTCCGAGCGCATCCTCAA GGCGATGAACGCTGACAAGCAGATGGGCATGAACGTGATCTCCGCCAAAGACCACGGTGAATCCTTCCAGATGCTCGAGTCCGGCCGTGCAGTCGCCTTC ATGATGGACGACGCGCTGCTGGCTGGCGAAATGGCCAAGGCCAAAAAGCCGGACGACTGGGCAGTGACCGGTACAGCGCAATCCTACGAGATCTACGGCT GCATGGTCCGCAAGGGCGATGCCCCGTTCAAGAAGGCCGTGGATGACGCCATTGTCGCTACCTACAAGTCGGGCGACATCAACGCCATCTACAGCAAGTG GTTCATGTCCCCTGTCCCTCCGAAAGGTCTGAACCTGAATTTCCCGATGAGCGACAAGCTCAAGGAACTGATTCAGAACCCGACCGATAAGCCAGCTGAC GACAAGAAAGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAGACCGGTTCAGCCAGTCTGAACTGACGGCATCCCGGGCGGGCAGCGCTCGTCCGGGATCGCCTCGTCACTCTCGACAGACGACAGTGCGTGCATTTCG ATAGCAATAAAAAGAGGGGGAGACCCTGATGAATTACAACTGGGACTGGGGCGTATTCTTCAAGTCCACCGGCGTCGGCAGCGAGACCTATCTGGACTGG TTCATCTCCGGCCTGGGCTGGACCATCGCCATCGCTGTCATTGCCTGGATCATTGCCCTGATACTGGGTTCGGTGCTGGGCGTCATGCGCACCGTGCCAA ACCGTCTGGTGTCAGGTATCGCCACGGTATACGTGGAAATCTTCCGTAATGTGCCACTGCTGGTGCAGCTGTTCATCTGGTACTTCCTGGTGCCCGACCT GCTGCCGGAAAACCTGCAGGAGTGGTACAAGCAGGACCTGAACCCGACCACCTCCGCGTTCCTCAGCGTAGTGGTCTGCCTTGGCCTGTTCACCGCTGCC
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| Amino Acid Sequence |
>ABC transporter
MRIVPHLLGAAIAAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHDIQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLV QNGTVDVECGSTTNNVERQQQVDFSIGIFEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAF MMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDINAIYSKWFMSPVPPKGLNLNFPMSDKLKELIQNPTDKPAD DKKA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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