Pseudomonas syringae pv. syringae HS191, PSYRH_RS06105 (sbcB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae HS191, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACCCGCAGCCCGAGCAGGCGCTTGCCCGGTGTGCGTCCCTGGTTGAGTACTTCAAACAGCACCATGTACCACCAGTTCACCAGAAAAAACACCAGAGCGG CCAGACCCATGCCGAGCTTGTCGAACAGCTGCAGAAGCACAAAGAACACGCCGAGGAGGGCTGCGCGAATGGCGAAGTCGATGCCGAACGCCAATGCGCG GGAAACCAGCCCGGCAGGGCGCAGAAGCATATCGATGCCTTCTGGCGTCTCGATTTCAATGCGCGTGTCCAACGGCGTGGGCAGCGCTGCACTCCTTGGC GAAGCGGGACGGGATGACATTGTCGGAAGGACGCGCCTGAAAACCAAAACTGATGCTAGCTACCGCAGCGGAGCTAAGCAACCGACCATTCAATACGCGG GCTGTAAGAAAACATTTCCCGGTGCGCCGGATACGACCCGATTAGCCAATGACACCTGTCACGCCCTACACTTCGCGGGTCTTTTGTTCAGGATCAGCCC
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| DNA Sequence for Gene |
>PSYRH_RS06105
|sbcB
GTGACCTCCAGCATCTTCTGGTACGACTACGAAACCACCGGTATCAACCCGCGCAATGACCGTGCGCTGCAGATGGCCGGAATTCGCACGGATACCGACC TCAATGAAATAGCGCCTCCGGTCAATCTGCACTGCCAGCTCAGCGATGACATCCTGCCTCATCCTGTCGCCTGCATGATTACCGGAATCACTCCGGCCAC GCTGGCAGAAAAAGGCCTGTGCGAGGCCGATTTCATGACGCGCGTACATGCCGAGCTGTCTGCTCCGGGAACCTGTGGCGCGGGTTACAACACCTTGCGT TTTGATGATGAAGTCACGCGCTACAGTTTTTATCGCAACTTCTTCGACCCCTATGCGCGCGAATGGCAGGGGGGCAACAGTCGCTGGGATCTGATCGATG TTGTGCGGGCTGCCTACGCATTGCGCCCCGATGGCATTGTCTGGCCGGAACAGGACGGCCGGGTCACGCTTAAACTGGAGCGGCTGACGGCTGCCAATGG TATTGATCACGGGCAGGCACACGACGCGTTATCCGATGTGCGTGCAACTATTGCGCTGGCACGTTTGATTCGTGAAAAGCAGCCGAAGCTTTACGACTAT CTGTTCGCATTGCGCAGCAAACAGAAAGTCCAGGAACAGGTTCGCCTGATGCAGCCTCTGGTGCATATTTCGGGACGCTTTTCTGCGGCGCGCAATTACC TGGGCGTGGTGCTGCCGTTGGCCTGGCACCCGCATAATCGCAACGCGCTGATCGTGTGTGATCTGCACCTGGATCATTCACCGTTGTTGCACGAGGGCGC TGAAACACTCAAGCGGCGTTTATATACGCGGCACGACGCGCTGGGCGACGGCGAATTGCCCGTCCCGCTCAAACTCTTGCATATAAACCGTTGCCCGGTG ATCGCGCCGCTGGGGGTGCTGCGCAGCGAAGATCAGCAGCGGCTGCAACTGGACATGGCCGGCTATCAGGCACGCGCAGCGCAATTGAGTGAACGCCGCG AAGTTTGGCACGATAAACTGGCGGCCGTTTACGGCAAGGACGACTTCGTCGCAAGTGAAGATCCCGAACAGCAGTTATATGACGGTTTTATAGGTGACCG TGATCGTCGACTGTGTGAGCAAGTTCGGCAGGCCGAGCCCGAACAACTGGCGCGTGACGCCTGGCCGTTTGATGATGCCCGATTGCCTGAATTGTTATTC CGGTATCGCGCTCGTAACTTTCCTGACACCTTGAGTGGCGAAGAGCAAACACGCTGGCGGGATTTCTGTCAGCAGCGCTTGCGCAGCCCGGAATGGGGCG CTCCCAACACCCTGCATGACTTTACGGCCGCTTGGGTAGAATGCTCCCTTAGTGCCGCGCCAGAGCAGTTAGAGGTGTTGCGGCAGTGGCAGGATTACGC CAACAAGCTGAGTAACCGTCTGGGCGTATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAATACCGGGCAATAAAAAACGCCAGCAGGCTGGCGTTTTTGCAATCGCAATGAACCGCGATCTGGTGAAGCTTAGCCCAGCAAAGTGGCCCAGCTTTCA ACGTCGTCGCTGCCCCACTTGGCTTTCCACTCTTTCAGCGTCTTGTGGTTGCCACCTTTAGTTTCGATGACTTCACCGTTGTGCGGGTTCTTGTATTGCT TGACCTTGCGCGCGCGTTTGGTGCCGGCAGGTTTAACAGCGCCGCCACGGGGGGCCTTGTTTACCTTGGCATCCGGATCCAACAGGGCAATGATGTCACG CAGCGACTTTTGGTATTCGCCCATCAGCGTGCGCAGTTTGCCTTCGAATTCCAGCTCGGTTTGCAGTTTGTCGTCTTGCGACAGGTTCTTCAAACGGGCT TGCAGTTCTTTGATGGCTTCTTCTGTAGCGCGGTATTCGTTGATCAGGGACATGAGGAGACCTTATGTTGTGAGGGTTGCAGGGATACAGTGCGGCAATA
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| Amino Acid Sequence |
>exonuclease I
MTSSIFWYDYETTGINPRNDRALQMAGIRTDTDLNEIAPPVNLHCQLSDDILPHPVACMITGITPATLAEKGLCEADFMTRVHAELSAPGTCGAGYNTLR FDDEVTRYSFYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGIVWPEQDGRVTLKLERLTAANGIDHGQAHDALSDVRATIALARLIREKQPKLYDY LFALRSKQKVQEQVRLMQPLVHISGRFSAARNYLGVVLPLAWHPHNRNALIVCDLHLDHSPLLHEGAETLKRRLYTRHDALGDGELPVPLKLLHINRCPV IAPLGVLRSEDQQRLQLDMAGYQARAAQLSERREVWHDKLAAVYGKDDFVASEDPEQQLYDGFIGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPELLF RYRARNFPDTLSGEEQTRWRDFCQQRLRSPEWGAPNTLHDFTAAWVECSLSAAPEQLEVLRQWQDYANKLSNRLGV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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