Pseudomonas syringae pv. syringae HS191, PSYRH_RS04205
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae HS191, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GATGTACTGCTTTACCTGCCTGAGGACGTGAGCAATCCGAATCGGTCGAGCCAGGTCGTGGTGCCTGCCCTGCGGATTCTCGGCGTTGGCGCGCTGCTCG GTCCGGACCGCAACGGCAAGCCGGTGCAGGACCTCAACGCTGACGAACGCCTCAAACAGGAGCAGCAGCGAATCAACGCGCGAACCGTCACGGTCGCGGT GCCGCAGGCCCTGGTGGCGCGCCTGATGCTGGCGTCGCAAACCGGTGTTCTGCGTCTGGCCGTGCGCAGCGCCGACGAGGGCAACCTGCAGGACTACTGG GCCAACGAAGCCGGCGGCCCTGACGCTGCCGAGCGACTCGATTCAGCCAACCGCCAACTGGTCAGCTTCAGACAACTGAGCCTGGGGCCGGCCAGCGCGC CAGCAGCAGGCGCAATCCCGCGTACGTCTCGCGCTGTCGAGGTCATACGCGGTAACCAGATCACGCAACAAACTCCCTGATTGAGCAAGGATTGCATTTG
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| DNA Sequence for Gene |
>PSYRH_RS04205
ATGAGCTGTTGTTCCGTGCCAGTTATAAAACCCCGGCTGCTGGCGTTAGTCCTTGCAGCACTGTCCGCGCCAGGCGCGTGGGCCGCTTCGGGCAATTGTG CCGGCCTTGCCGCCATGCCGGCGGCCGTGGAAATCGACCAGGGCATTCAACAGGAGGTCCGCTCTGCGGTACCCATCACCCGCATCGCCGTGGGTGATCC GAAAATCGCCGATGTGCACGTCAACGGCACCGACGGTTTTCTGTTGACCGGCGTCGCGCAGGGTACGACCAGCCTGATGGTCTGGACTGCCTGCGCAAGT GCGCCGCGCCAGAGCATGGTCTTCGTCCGTGGCCGGGCGACGACCGCCATGGTCGAGAGTGTCACCGCGCCGTCTGCCGATGCGCAGTTACCCAGCCAGG TGCAGACTGACATCCGCTTTATCGAAGTCAGCCGCACCAAGCTCAAGGAGGCCAGCACCTCGATCTTCGGCAAAGGCTCGAGCAACTTTCTGTTCGGCGC GCCCGGCACGGTGCCGGGCGTCAACGTCACACCTGGCGCTGTGGGCGGCATAACGCCGAGCATTCCGCTGAACAACAGCAATTTCAATATCGTCTGGGGC GGTGGCAGCAGCAAGGTGCTGGGCATGATCAATGCCATGGAAAACAGCGGCTACGCCTACACCCTGGCACGCCCCAGCCTGGTCGCCCTCAACGGGCAAA GCGCGAGCTTTCTGGCCGGCGGCGAATTCCCGGTGCCGGTGCCCAATGGTGAAGGCAACGGTATCTCCATCGAGTACAAGGAGTTCGGCGTGCGCCTGAC CCTGACCCCGACAGTCGTGGGCCGGGACCGGATTCTGCTGAAGGTCGCACCGGAAGTCAGCGAGCTGGACTTCTCGGCCGGTATCACCATCGCCGGGACC ACTGTGCCGGCACTCAACATCCGCCGTACCGACACCAGCATTGCGCTTGCCGACGGCGAGAGCTTCGTGGTCAGCGGCCTGATCAGTTCCAGCAACAGCG GCTCGGTGGACAAGTTTCCCGGCCTCGGCGACATCCCGATTCTCGGTGCATTTTTCCGCAGCTCGCAGATCCAGCGCGACGAGCGCGAACTGCTGATGAT CGTCACTCCGCATCTGGTCCAGCCACTGGCCGCCAACGCCCGCCTGCCGTCACTGCCAGGCGAGGGGCTGCGCACCTATGACCCGAGCTTCCCGCGTCTG TATTTTCTGGAAAACGGCGATTTCGACCGCCGCGACGGATTATCCAAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCAGAGCCTGAGCCAGACCTTCCTGGCAATCACCCGTAATAATACCGACCTGGAGTGGCTGCAAAGTGCTCTGGGTTCGCTGGGTCAGGTGGTCAGTGC CGGTACGGGCAGCCTCGACGACCTCCTGGCGCTGGTGGACGTGACGTTTGCCAGCGTGGTGTTCGTCGGGCTCGACCGTGAGCATTTGATGACTCAGAGC GCCCTGATCGAAAGTGCGCTGGAAGCCAAGCCGATGCTGGCCATCGTTGCGCTCGGCGATGGCATGGACAACCAGTTGGTGCTTAACGCCATGCGCGCCG GGGCCAGGGACTTCGTTGCCTACGGGTCCCGCTCCAGTGAGGTCGCCGGCCTGGTCAGACGTCTGAGCAAGCGCCTGCCCGCCGTGACGCCCAACCCGAA CATGAGCGGCCTGTCGGTGCTGTATGGCGTACAAAGCGACGACGACGGGGCCTTGATCGCGACGCACCTGGCGATGGTCGTGCACAAGACCGGCCAGCGC
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| Amino Acid Sequence |
>type II and III secretion system protein
MSCCSVPVIKPRLLALVLAALSAPGAWAASGNCAGLAAMPAAVEIDQGIQQEVRSAVPITRIAVGDPKIADVHVNGTDGFLLTGVAQGTTSLMVWTACAS APRQSMVFVRGRATTAMVESVTAPSADAQLPSQVQTDIRFIEVSRTKLKEASTSIFGKGSSNFLFGAPGTVPGVNVTPGAVGGITPSIPLNNSNFNIVWG GGSSKVLGMINAMENSGYAYTLARPSLVALNGQSASFLAGGEFPVPVPNGEGNGISIEYKEFGVRLTLTPTVVGRDRILLKVAPEVSELDFSAGITIAGT TVPALNIRRTDTSIALADGESFVVSGLISSSNSGSVDKFPGLGDIPILGAFFRSSQIQRDERELLMIVTPHLVQPLAANARLPSLPGEGLRTYDPSFPRL YFLENGDFDRRDGLSK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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