Pseudomonas syringae pv. syringae HS191, PSYRH_RS03140
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae HS191, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCGATGCGATCGGCAATCTTCAGCAGGGCCAGTGAGCGGGCCTGCACCGAGGTCGAGCCCCAGGCTGCAGCGGCGGCGTGCGCAGCGTCGAGTGCCTTGT CGATGTCTTCGGCAGTGGAGCGCGGAAACTCTGCGATGGCCTTGCCGGTGACCGGCGAGGTGTTGGTGAAATACTGGCCTTTGACCGGCGCGACGAACTC GCCGCCTATGTAGTTACCGTAGCGTTCCTTGAAGTTGACGATGGCGCCTTCGGTACCGGGATGAGCGTAACGCATGGTATGTCTCCTGGTTCTTGTTGTG AGGGAGTCTGAGTCGATTCTGCTTTCGGGTAGCTGGCAATGAGCGTTCAAGAATAGGCCATTTGCATTCGGCCGTGGCTAGGACTTTAGGCTTATCTGCC GGGCATTGAAATGGGGCGTGCGCGCAAGACGACGGACAAACTCAGGGTGCCATTTCACCGCCCCTACGTTAACCTGCGCAGATGTTCTGAGAGGTTGGTC
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| DNA Sequence for Gene |
>PSYRH_RS03140
ATGCATATTCATATCCTTGGTATCTGCGGCACGTTCATGGGGTCTCTGGCGGTGCTCGCCAAAGAGTTGGGGCACCGGGTCACTGGCTCCGACGCCAATG TCTATCCACCGATGAGCACCCAGCTCCAGGCGCAGGGCATCGAGCTGACCCAAGGCTATGATCCCGTGCAACTGATCCCCGCGCCGGACCTGGTGGTAGT CGGCAACGCGCTGTCGCGTGGCAACCCGGCGGTTGAATATGTGCTCAACACAGGTTTGCCGTATGTGTCTGGCCCGCAGTGGCTGGCGGACCATGTGCTG CAAGGTCGCTGGGTACTGGCCGTGGCCGGCACACACGGCAAGACCACCACCAGCAGCATGCTGGCCTGGGTGCTGGAACACGCGGGCATGAGCCCCGGCT TCCTGATCGGAGGCATCCCGCAGAACTTCGCCGTGTCGGCGCGTCTGGGCGAGACCCCGTTCTTTGTGGTCGAGGCGGATGAGTACGACAGCGCGTTCTT CGACAAACGCTCCAAGTTCGTCCACTACCGTCCGCGGACAGCGATCCTCAATAATCTTGAGTTCGATCATGCCGACATCTTCCCCGATCTGCCAGCCATC GAACGTCAGTTTCACCATCTGGTGCGAACTATCCCGAGCGAAGGCCTGGTAATCCACCCGACTACCGAGCCGGCGTTGTCGCGGGTCATCGAGATGGGCT GCTGGACGCCGGTACAGACCACGGGCCAGAACGGTCAGTGGCAGGCACGACTGTTGAGCGAAGACGGCTCGCGTTTTGAAGTGCTGTTCGAAGGCGAGCT TCAAGGCACTGTCGAGTGGGACATGACCGGTCAGCACAACGTGGCCAACGCCTTGGCGACGCTGGCGGCCGCTCGCCATGTGGGCGTCGTGCCGTTGCTG GGCGTGCAGGCGCTCAGTGCGTTCAAGAGCGTCAAACGGCGTATGGAAAAGGTCGCCGACGTGCGCGGCATCACTATTTATGATGACTTCGCTCACCACC CCACGGCTATCGCCACCACGCTGGACGGCCTGCGCAAAAAGGTCGGTGATGCATCGATCATTGCGGTCGTCGAGCCGCGCTCCAACTCGATGAAGCTTGG CGCGCATCGCGATGGCTTGCGGGAAAGCGTGAGTCAGGCGGATCAGGTGGTCTGGTACGCCCCGCCCAATCTGGGCTGGGACCTGGCGGCAACAGTCGCG GGAGGCACTGTGCCTGCGTTGGTCTGTGATTCCCTTGAGGCAATCATCGCCCAGGTCAAAAGCCAGGCGCAGCCCGGTACGCACATCGTGATCATGAGCA ACGGCGGCTTTGGCGGCCTGCATGGCAAGCTGGCTGAGGCGCTTGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGCCCGGAGCGCGTTACGGTTGCCATGACTGGCGCTTCTGGCGCGCCATATGGCCTGCGCCTGCTGGATTGTCTGGTGCGTGAGGACCGGGAAGTACA TTTCCTGATCTCCAAGGCGGCGCAATTGGTGATGGCCACCGAGACCGATGTGCGCCTGCCGCCCAAGGCGATGATGATGCAGGCGTTTCTGACGGAGTAC ACCGGTGCGTCTGCCGGGCAGATTCGCGTGTATGGACGCGATGACTGGATGTCGCCAGTGGCCTCCGGCTCGGGGGCGCCCAGCGCGATGGTGGTGGTGC CGTGTTCCACCGGTTCGCTGTCAGCGATCGCCACCGGGGCCTGCAACAATCTGATCGAGCGCGCCGCTGACGTGACGCTGAAGGAGCGGCGCCAATTGAT TCTGGTGCCGCGCGAAGCGCCGTATTCCAGCATTCATCTGGAACACATGCTCAAACTGTCGAACATGGGTGCAGTGATTTTGCCGGCGTCTCCCGGCTTT
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| Amino Acid Sequence |
>UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
MHIHILGICGTFMGSLAVLAKELGHRVTGSDANVYPPMSTQLQAQGIELTQGYDPVQLIPAPDLVVVGNALSRGNPAVEYVLNTGLPYVSGPQWLADHVL QGRWVLAVAGTHGKTTTSSMLAWVLEHAGMSPGFLIGGIPQNFAVSARLGETPFFVVEADEYDSAFFDKRSKFVHYRPRTAILNNLEFDHADIFPDLPAI ERQFHHLVRTIPSEGLVIHPTTEPALSRVIEMGCWTPVQTTGQNGQWQARLLSEDGSRFEVLFEGELQGTVEWDMTGQHNVANALATLAAARHVGVVPLL GVQALSAFKSVKRRMEKVADVRGITIYDDFAHHPTAIATTLDGLRKKVGDASIIAVVEPRSNSMKLGAHRDGLRESVSQADQVVWYAPPNLGWDLAATVA GGTVPALVCDSLEAIIAQVKSQAQPGTHIVIMSNGGFGGLHGKLAEALE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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