Strain | Pseudomonas syringae pv. syringae HS191, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CCGACCTGCGCGCGCTGATTCTCAAGGCCCGGCCGCAGGTTGTGGTGATGCCGCACCCTGCCATCGACCCCCATCCCGATCACATCTGCGCCCAGGCTGC GGTGCGTGAAGCCCTGCTCGGGCTCGAATGGCAGCCGGACGTGGTGCTCGGTTATGCCAATCACCTGCACGACAACGACCGCTGGCCGATGGGCGATGCC TACAGCGGCATCAGCCTGCCGCCGGTATTCGATGCCGCGCTGGCGCTGGTGCCGTACAGCCTTCAATTGTCGGTCGCCGCGCAACGCGACAAGGCGATGG CGCTGGGGATGATGCATGACCTGCTGCCGCCGATGCCGTTCAAGCGCCGTGTGCGCCGTGCGCTGCAGCGGGTTCTGGCCGGTCGCCGCTGGCCGGCCGA GGGCGAAAACGAATTCTTCCGCAAGGCGGTGCGACGACACGAGTTGTTCTGGTGCAGCCGTGATCTCTGATTCAGCAGGCGCAGTACTGCAAGGAAAACC
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DNA Sequence for Gene |
>PSYRH_RS02640
ATGAAAGTTCTACTGCTGGTCCAGAAAGAGCAGCGTGCGATTCTGGACCGTCTCTATGACGGCATCGCTGCACATTGTGAATGCGAAGTGCGCTGGCTGA GCTCTGCGGAGCAACGCAACCTGCGTGGTTATTTCCGCCGTGAGGTGGACGTCAGCCGCTATGACCGGATCGTGTTTTTCCTGCGTTTCAAGCAGGAAGT GCGTCAGGTCGGCTTCATCCGCACGATTCCCAATCTGGTCATCCTCGAACACGATGCTTACCAGAACTACATTCCGTGCAAATACACCGGCAAGTTCAGC GCGCACTACCGCAAGCTGCCCTGGGCGCGAGTAATCTGCTCGGGGTTCATGGTCAGCGAACGGCTGCGCCAGGAAGGCTTCGATGCGGTGTTCGTGCCCA AGGGCTATGACCAGAGCCTGCTGCAGTTGCAGACACGCGAGCGTGACATCGAACTGGCTTTCGTGGGCAGCACCAACAGCGTGGCCTACAGCGGTCGCAA GGCGTTGCTGGATGAGTTGGGCCAGGTCGAGAATCTGCTCGTCACGCGGACCAAGTCCGGCGAAGAGTATTGCGACACCCTGAACCGCATCCGTTTTTTC GTCAGTGCCGACGTGGGCATGGGCGAGTACATGATCAAGAATTTCGAGGCTATGGCGTGCGGCTGCGTGCTGCTTGCCTTCGATCAGGGCGCTGAAGAAA ACCGCGCGCTGGGCTTTGTCGACATGCACAACATCGTGCTCTATCGCGACATTCCCGAACTTCGCGAAAAGCTGGCGAAATTGCGCGATAACGTCACACT GGCTGGCGAAATATCTTGTAATGGGCAGACTTTGGTCGAGGAACGCTTTACATTCCATGCCCTTGGAAAAGCCATCGTGGACGCCATGCATGCGCCACTG CGCAGCATGCCGGCGGCGAGCTGGATCGATCGCCTGCGGTCACGATTGGGATGGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGAATTATGAATATTCAATGATTGGGAACGAATGATGGTATTCAGCGAAAACAGCGACATTACGCTGGTCGTCACCAGTTGTGGTCGATTCGACCTGTTG AAGCGCACCCTGGAAACGTTCGACCATTTCAACACTGCGCCCATACGCCATGTGCTGATTACCGAAGACTCCGGCGATGACCGGGTTCAGGCCTGCATTC CCGAGCACTGGCACCCGCATACGCGTTTCATCATCAACAACCCCAAGCTGGGGCAGATGCGCTCTGTCGACGCGGCCTATTCGCTGATCGAAACGTCCTG GGTGTTCCATTGCGAAGACGATTGGGATTTCTACCGTCCGCACTTCATCGAAGAGTCGATGACGCTGCTGAAACACGATCCGCAAGCCTTACAGGTCTGG TTGCGCAGCTACAATCACGATCTGCGTATCCACAGCCCTTACGTTTACCTCAACGAGCGTGAAGTGGTCGAGGGTATTGCGTTTTACAAGCTGGGCTCGC
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Amino Acid Sequence |
>glycosyltransferase group 1 protein
MKVLLLVQKEQRAILDRLYDGIAAHCECEVRWLSSAEQRNLRGYFRREVDVSRYDRIVFFLRFKQEVRQVGFIRTIPNLVILEHDAYQNYIPCKYTGKFS AHYRKLPWARVICSGFMVSERLRQEGFDAVFVPKGYDQSLLQLQTRERDIELAFVGSTNSVAYSGRKALLDELGQVENLLVTRTKSGEEYCDTLNRIRFF VSADVGMGEYMIKNFEAMACGCVLLAFDQGAEENRALGFVDMHNIVLYRDIPELREKLAKLRDNVTLAGEISCNGQTLVEERFTFHALGKAIVDAMHAPL RSMPAASWIDRLRSRLGW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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