Strain | Pseudomonas syringae pv. syringae HS191, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AATTGAGGTAGTCGATCATCGCCGCCAGGGTGGTCGACTTGCCTGAGCCGGTCGGACCGGTGACCAGAATCAGGCCTCGCGCCACGTCGGTAATCTTGCG AAACACATTGCCCATGCCCAAGTCTTCCATGCTCAGGATTTTCGAAGGGATGGTCCGGAAGACCGCGCCAGCACCGCGGTTCTGGTTGAAAGCGTTGACC CGAAACCGCGCCACGCCCGGCACTTCGAAGGAAAAGTCGGTTTCCAGCCGTTCTTCGAAGTCCTGCCGTTGCTTGTCGTTCATGATGTCGTAGATCAGCG CCTTGACCTCCTTCGCGTCCAGCGGAGGCAGGTTGATACGCCGTACATCGCCGTCGACGCGGATCATTGGCGGCAGACCTGCAGAGAGGTGCAAATCCGA CGCGCCCTGTTTGGCACTGAAGGCCAGCAGCTCGGTAATATCCATACAGCTCCTCAATCACATAGAATGCCGCAGACTTTAGCCCTGCTGGCGCAAATCA
|
|
DNA Sequence for Gene |
>PSYRH_RS02360
ATGTCCACGATAGCAGCGAACATTTCAACGCTCGAACAGCGAATTCGCGACGCAGCGCTTGCTGCTGAGCGCGATCCGGCGTCCGTCGGCCTGCTGGCGG TGAGTAAAACCAAGCCCGCCAGTGACCTGCGTGAAGCTTACACCGCAGGTTTGCGCGATTTTGGCGAAAATTATTTACAGGAAGCACTGGGCAAACAGCT CGAACTGAGCGACCTGCCCTTGTGCTGGCACTTCATTGGCCCCATTCAATCGAACAAGACGCGAGCTATCGCCGAGAACTTCGACTGGGTACATTCCGTG GACCGCCTGAAAATCGCTCAACGCCTGTCCGAGCAACGCCCCGAAGCGCTTGAACCGCTGAACATCTGCATTCAGGTGAACGTCAGTGGCGAAGCCAGCA AATCGGGCTGTACGCCTCAGGACCTGCCTGCGCTGGCCGCTGCCATCAGCGCCCTGCCGCGACTCAGGTTGCGCGGCCTGATGGCCATCCCCGAGCCTAC AGACGATCCTGCGGCGCAGAACGCATCCTTCGCCGCAGTGCGCACGCTGCAGGAGCAATTGCACCTGCCGCTCGACACACTTTCCATGGGCATGAGCCAC GACCTGGAAGCCGCCGTTGCACAAGGCGCGACCTGGGTGCGCATCGGCACCGCTCTTTTTGGCGCCCGCGACTATGGCCAGCCATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CCTCTTCACAAGGACCCCTTCATGAGCAAGACCCGTATTGCCTTCGTTGGTGCCGGAAACATGGCCGCCAGCCTGATCGGCGGCCTGCGCGCCCAGGGCG TGGAGGCGGCACTGATCAGTGCCAGTGCGCCGGGTGCCGAAACCCGCGAGCGCATCGCCAACGATCACGGCATCCAGGTATTCGCCGACAACGCCGACGC GATCAATGGCGCCGACGTGGTGGTACTGGCGGTCAAGCCGCAGATGATGAAAAACGTCTGCCAGGCCTTGAAGCCCAGTCTCGAACCTCACCAGCTGATT GTTTCGGTCGCGGCCGGCATCACCTGCGCCAGCCTGACGCAATGGCTGGGTGAGCAGCCGGTGGTGCGCTGCATGCCCAATACGCCCTCACTGCTGCGTC AGGGTGCCAGCGGGTTGTACGCCACCGACAACGTCACGCCAGAGCAGCGTGAGCAGGCCGAGGCGTTGCTGGCCGCAGTCGGCATCGCGGTATGGGTCGA
|
|
Amino Acid Sequence |
>hypothetical protein
MSTIAANISTLEQRIRDAALAAERDPASVGLLAVSKTKPASDLREAYTAGLRDFGENYLQEALGKQLELSDLPLCWHFIGPIQSNKTRAIAENFDWVHSV DRLKIAQRLSEQRPEALEPLNICIQVNVSGEASKSGCTPQDLPALAAAISALPRLRLRGLMAIPEPTDDPAAQNASFAAVRTLQEQLHLPLDTLSMGMSH DLEAAVAQGATWVRIGTALFGARDYGQP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|