Pseudomonas syringae pv. syringae 41a, PSS41A_RS20965

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. syringae strain 41a 41A07, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AATTGTTGCGTAACTGAAATACTGCGTGCAGAGGACAACCGATGGCTGATGAAAACGATATGACGTCTGCTGAAGACCAGGCATTGGCCGATGAATGGGC TGCTGCATTGGGCGAAGCTGGCGACAGTCAGGCTGATATTGATGCGTTGCTGGCTGCGGACGCCGGCAATTCGGGTAGCCGGATGGCTATGGAGGAGTTC GGCAGCGTGCCGAAAAGCACCGGTCCGGTTTCTCTGGATGGTCCCAACCTGGATGTGATTCTCGACATTCCGGTGTCGATTTCCATGGAAGTAGGCAGCA CCGACATCAACATTCGTAACCTGTTGCAGCTCAACCAGGGCTCGGTGATCGAGCTGGATCGTCTGGCAGGCGAACCCCTGGATGTGCTGGTCAACGGCAC ACTGATCGCGCATGGCGAAGTGGTGGTGGTCAACGAAAAGTTCGGCATCCGTCTGACCGACGTGATCAGCCCGAGCGAACGCATCAAGAAGCTGCGCTAA
DNA Sequence for Gene
>PSS41A_RS20965
GTGAGGCGCTGGCTGAGTGTTTTGCTGACCCTGCCATCGCTGGCCTGGGCTGCCGAACCCGCCGCTCAGGCGGCACCTGCGCAAGTGGCCAACACGGTCT CCGGCGGCATGGGCGGGCAGGTGGTGCAATTGCTGTTCGGTCTGATTCTGGTGATTGGTCTGATTTTCGTGCTCGCCTGGCTGATGCGCCGGGTGCAGCG CGTCGGGCCGAACAGCAATCAGGTGATCGAGCTGGTGAGTTCGCGCGCACTGGGCCCGCGTGATCGGCTGGTGCTTGTGCAGATCGGTAATGAACAAGTG CTGCTGGGCATTACGCCCGGGCGAATCACGCCTCTGCATGTGCTCAAGGAGCCCGTACAGGTGCCGGTGCGCGAGCAGGCTACCCCTGAATTCGCTCAGC GCCTGATGGAGCTGATGGGCAAGGATAAGGACAAGAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGGCGCCTTGCGTTTCCTGATACTGCTGTTGCTGGTCATGGTGACGCCTGCTGCGTTGGCGGCCGATCCACTGTCGATCCAGGCGATCACGCTGTCCAA CGGTGCCGATGGTCAGCAGGAGTATTCGGTCAGTCTGCAGATTCTGCTGATCATGACTGCGCTGAGCTTCATTCCGGCGTTCGTCATGTTGATGACCAGC TTCACGCGAATCATCATCGTCTTCTCGATTCTGCGTCAGGCCCTCGGCCTGCAGCAGACGCCGTCGAACCAGATCCTCACCGGCATGGCGTTGTTTCTGA CCATGTTCATCATGGCGCCGGTCTTCGACCGGGTGAATCAGGATGCCTTGCAGCCTTATCTGGCCGAGAAGCTTTCGGCGCAGGATGCGGTGGCCAAGGC GCAGGTGCCGATCAAGGACTTCATGCTGGCCCAGACGCGCACCAGTGACCTCGAGCTGTTCATGCGCTTGTCCAAGCGTACCGACATCCCGACCCCGGAT
Amino Acid Sequence
>flagellar assembly protein FliO
MRRWLSVLLTLPSLAWAAEPAAQAAPAQVANTVSGGMGGQVVQLLFGLILVIGLIFVLAWLMRRVQRVGPNSNQVIELVSSRALGPRDRLVLVQIGNEQV LLGITPGRITPLHVLKEPVQVPVREQATPEFAQRLMELMGKDKDKK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site