Pseudomonas syringae pv. syringae 41a, PSS41A_RS20955
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae strain 41a 41A07, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CACCGGCATGGCGTTGTTTCTGACCATGTTCATCATGGCGCCGGTCTTCGACCGGGTGAATCAGGATGCCTTGCAGCCTTATCTGGCCGAGAAGCTTTCG GCGCAGGATGCGGTGGCCAAGGCGCAGGTGCCGATCAAGGACTTCATGCTGGCCCAGACGCGCACCAGTGACCTCGAGCTGTTCATGCGCTTGTCCAAGC GTACCGACATCCCGACCCCGGATGCCGCGCCATTGACCATTCTGGTTCCGGCGTTCGTGATTTCGGAACTCAAGACGGCGTTTCAGATCGGTTTCATGAT CTTCATTCCGTTTCTGATCATCGATATGGTGGTGGCCAGTGTGCTGATGGCGATGGGTATGATGATGCTGTCGCCGCTGATCATTTCTCTGCCGTTCAAG ATCATGTTGTTTGTGCTGGTGGACGGCTGGGCGCTGATTGTCGGCACCCTGGCTGGCAGTTTTGGTGGCGTATGAGCCGTTTTACTGAGGAGTCTGCCCG
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| DNA Sequence for Gene |
>PSS41A_RS20955
ATGACGCCGGAAGTAGCCGTCGATCTGTTCCGCGAGGCCCTGTGGCTGACTACTGTGCTGGTCGCGATTCTTGTAGTGCCAAGTCTGTTGTGCGGTCTGC TGGTGGCCATGTTTCAGGCCGCCACGCAGATCAACGAACAGACCTTGAGCTTCCTGCCGCGCCTGCTGGTGATGCTCATCACCCTCATCGTCATCGGCCC GTGGCTGTTGAAAATATTCATGGAATACATGCTGTCGTTGTACACCAGTATTCCGACACTGATCGGCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CACTGCATGCAGCCGATGCTTGCGCTGACCGATACCCAGATCAGTACCTGGGTAGCGAGTTTCATGCTGCCGCTATTTCGCATCATCGCGTTGCTGATGA CCATGCCGATCATCGGCACCACGCTGGTCCCGCGTCGCGTACGCATGTACCTCGCCGTGGCGATTACCGTGGTGGTCGCGCCTGCGCTACCTGCCATGCC GCCCGTGCAGGCGCTCGACCTGAGCGCGTTGTTGCTGATCGGTGAGCAGATCATCATCGGCGCCGGGATGGGCCTGTCGCTACAGTTGTTCTTCCATATC TTCGTGGTTGCGGGGCAGATCATCTCGACGCAGATGGGGATGGGCTTTGCGTCGATGGTCGACCCTACCAACGGTGTTTCCTCCGCGACCATCGGCCAAT TCTTCACGATGCTGGTCACCCTGTTGTTCCTGGCCATGAACGGCCATCTGGTGGTGCTGGAGATTCTCGTCGAGAGCTTTACCACGATGCCGGTCGGCAG
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| Amino Acid Sequence |
>flagellar biosynthesis protein FliQ
MTPEVAVDLFREALWLTTVLVAILVVPSLLCGLLVAMFQAATQINEQTLSFLPRLLVMLITLIVIGPWLLKIFMEYMLSLYTSIPTLIG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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