Pseudomonas syringae pv. syringae 41a, PSS41A_RS18390

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. syringae strain 41a 41A06, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AACAGGGGTTGTAGGGTCAAAAACGCAACGTGGATACGGGCGAAAGGCCATCTTTGAGTGGTCCACGCGCCTTTCAGCACGTGGCCTTCAGACATTCCCT CCATTTCCTCATCCGACACTCCTTTTGCCTGTCGGATATTTCTTTTTCCAAGCCATTCACTCTCTCATGGCACGTTTTCCATCCGTGGCTAATATCGGAA ATAACTTACAACCCCCCTCTGCCTACAACACGGACATCATCCCCTATATCCAACATCGTCTCCCTGCGCCATTTAACGAATTTGTGAAAGGCTATTTTCT AACTGAAAAAAAAAGTGCATCATTTGCGGGCGACTGAGTTATAAATACCCTCTATCTGCACAACGACAAGCCGCAAAGGCCAAGTTTCAGCATAGAAACC GCAGGTATCGGGCACCCTCGAGTGAGCGAATCGACCTATCAGTTTTGTCTCATCGCTTTATAGGGCTGACAACAGCCATTACATTGTTGGAGTATATTAA
DNA Sequence for Gene
>PSS41A_RS18390
TTGTCCAGACTTGCCGAGTTTCGAGCAGCAGAGAAAGCCCTTCAGGAACAGCTTGCACAGCTGGAATCGTTGAAGAATGACGCCGGATTGAAGAAGGAGA TCGAATTCGAGCAAAAGCTCCAGGACCTGATGGGCACCTACGGTAAAAGCCTGCGTGACATCATCGCAATCCTTGACCCTTCGAGTGCAACCTCGCTGGT TGCACCCGCAGGGCCAAAGCGTCGCCGTGCACGCGTGGTCAAGGTTTACCAGAACCCGCATACCGGCGAGCTGATTGAAACCAAGGGCGGCAACCATCGC GGCCTCAAGGCATGGAAAGAGCAATACGGTGTAGACACTGTTGATTCATGGCTGCGTGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTGCAAGTTGTCACTTGAAGCCCTGCACTTGCAGGGCTTTTTTATCTTCGTCACTGCAGCTCTTCACCTGCGTACTGCAGGGCTGTGCTCAGGCGTCATC ACACAGTACCTGTCTATCCGCAGCGGAAATTCATATACATGATTAGGTGGACTGCCCGGTTCGTATACTTCAATGCAGCGTGTAAATGCCGCGAGAATAA TGACGTCAATAAATCCGGATTATGCGATTCAGCACACAGTTACAAACCTGAACAGTTCCTGAAGTGCGTAGAGTAATTATTCAGTTTGACCGCGTGATGA GATACATCACTATTTGTTTCTCAATGATTCGTCGCGCTGAAACGCATCGATTGCGCAACACAGCGCAGCTTCACACTTTTTTCACATGGACTCTCGGATG ATGAAGACCGCTAAAGGAATAGCGCCCCATGCCCGCCTCGGCGGGCTTCTTTTTGTCTGCGAAAAGGCAGATGTCACTGCGTAACGTCCAGACGCAGACT
Amino Acid Sequence
>transcriptional regulator
MSRLAEFRAAEKALQEQLAQLESLKNDAGLKKEIEFEQKLQDLMGTYGKSLRDIIAILDPSSATSLVAPAGPKRRRARVVKVYQNPHTGELIETKGGNHR GLKAWKEQYGVDTVDSWLRA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site