Pseudomonas syringae pv. syringae 41a, PSS41A_RS15750
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 534 | 686 | 1.73E-48 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 530 | 686 | 3.72342E-63 |
| Coils | Coil | Coil | - | - | 413 | 433 | - |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 523 | 688 | 2.9E-52 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 315 | 343 | - |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 370 | 687 | 4.0E-68 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 527 | 687 | 1.7E-49 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 529 | 685 | 2.0E-45 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 173 | 266 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 175 | 205 | - |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 520 | 688 | 6.5E-58 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 518 | 689 | 3.1E-59 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.