Pseudomonas syringae pv. syringae 41a, PSS41A_RS13910
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae strain 41a 41A04, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGACCTGCGCGCGCTGATTCTCAAGGCCCGGCCGCAGGTTGTGGTGATGCCGCACCCTGCCATCGACCCTCATCCCGATCACATCTGCGCCCAGGCTGC GGTGCGTGAAGCGCTGCTCGGGCTCGAATGGCAGCCGGACGTGGTGCTCGGTTATGCCAATCACCTGCACGACAACGACCGCTGGCCGATGGGCGATGCC TACAGCGGCATCAGCCTGCCGCCGGTATTCGATGCCGCGCTGGCGCTGGTGCCGTACAGCCTTCAATTGTCGGTCGCCGCGCAACGTGACAAGGCCATGG CACTGGGGATGATGCATGACCTGCTGCCGCCGATGCCGTTCAAGCGCCGTGTGCGCCGTGCGCTGCAGCGGGTTCTGGCCGGTCGTCACTGGCCGGCCGA GGGCGAAAACGAATTCTTCCGCAAGGCGGTGCGACGACACGAGTTGTTCTGGTGCAGCCGTGATCTCTGATTCAGCAGGCGCAGTACTGCAAGGAAAACC
|
|
| DNA Sequence for Gene |
>PSS41A_RS13910
ATGAAAGTTCTACTGCTGGTCCAGAAAGAGCAGCGTGCGATTCTGGACCGTCTCTATGACGGCATCGCCGCACATTGTGAATGCGAAGTGCGCTGGCTGA GCTCTGCGGAGCAACGCAACCTGCGTGGTTATTTCCGCCGTGAGGTGGACGTCAGCCGCTATGACCGGATCGTGTTTTTCCTGCGTTTCAAGCAGGAAGT GCGTCAGGTCGGCTTCATCCGCACGATTCCCAATCTGGTCATCCTCGAACACGATGCTTACCAGAACTACATTCCGTGCAAATACACCGGCAAGTTCAGC GCGCACTACCGCAAGCTGCCCTGGGCGCGGGTAATCTGCTCGGGGTTCATGGTCAGCGAACGGCTGCGCCAGGAAGGCTTCGATGCGGTGTTCGTGCCCA AGGGCTATGACCAGAGCCTGCTGCAGTTGCAGGCACGCGAGCGTGACATCGAACTGGCTTTCGTGGGCAGCACCAACAGCGTGGCCTACAGCGGTCGCAA GGCGTTGCTGGATGAGTTGGGCCAGGTCGAGAATCTGCTCGTCACGCGGACCAAGTCCGGCGAAGAGTATTGCGACACCCTGAACCGTATCCGTTTTTTC GTCAGTGCCGACGTGGGCATGGGCGAGTACATGATCAAGAATTTCGAGGCCATGGCGTGCGGCTGCTTGCTGCTTGCCTTCGATCAGGGCGCTGAAGAAA ACCGCGCGCTGGGCTTTGTCGACATGCACAACATCGTGCTCTATCGCGACATTCCCGAACTTCGCGAAAAGCTGGCGAAATTGCGCGATAACGTCACACT GGCTGGCGAAATATCTTGTAATGGGCAGACTTTGGTCGAGGAACGCTTTACATTCCATGCCCTTGGAAAAGCCATCGTGGACGCCATGCATGCGCCACTG CGCAGCATGCCGGCGGCGAGCTGGATCGATCGCCTGCGGTCACGATTGGGATGGTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGAATTATGAATATTCAATGATTGGGAACGAATGATGGTATTCAGCGAAAACAGCGACATTACGCTGGTCGTCACCAGTTGTGGTCGATTCGACCTGTTG AAGCGCACCCTGGAAACGTTCGACCATTTCAACACTGCGCCCATACGCCATGTGCTGATTACCGAAGACTCCGGTGATGACCGGGTTCAGGCCTGCATTC CCGAGCACTGGCACCCGCATACGCGCTTCATCATCAACAACCCCAAGCTGGGGCAGATGCGCTCTGTCGACGCGGCCTATTCGCTGATCGAAACGTCCTG GGTGTTCCATTGCGAAGACGATTGGGATTTCTACCGTCCGCACTTCATCGAAGAGTCGATGACGCTGCTGAAACACGATCCGCAAGCCTTACAGGTCTGG TTGCGCAGCTACAATCACGATCTGCGTATCCACAGCCCTTACGTTTACCTCAACGAGCGTGAAGTGGTCGAGGGTATTGCGTTTTACAAGCTGGGCTCGC
|
|
| Amino Acid Sequence |
>glycosyltransferase
MKVLLLVQKEQRAILDRLYDGIAAHCECEVRWLSSAEQRNLRGYFRREVDVSRYDRIVFFLRFKQEVRQVGFIRTIPNLVILEHDAYQNYIPCKYTGKFS AHYRKLPWARVICSGFMVSERLRQEGFDAVFVPKGYDQSLLQLQARERDIELAFVGSTNSVAYSGRKALLDELGQVENLLVTRTKSGEEYCDTLNRIRFF VSADVGMGEYMIKNFEAMACGCLLLAFDQGAEENRALGFVDMHNIVLYRDIPELREKLAKLRDNVTLAGEISCNGQTLVEERFTFHALGKAIVDAMHAPL RSMPAASWIDRLRSRLGW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|