Pseudomonas syringae pv. syringae 41a, PSS41A_RS08340
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae strain 41a 41A02, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGTCCTGACCTGTCTCTGGGTGAGTACTCGGACGTGGGTAGCATCATCGAAGCGTTCGCTTCCGAGCACGCGATGGTCAAGGTCGGTACCGTTATCGAT CCGGACATGCGTGACGAGTTGCACGTGACCGTGGTTGCCACCGGCCTGGGCGCGAAAATCGAGAAACCTGTCAAGGTCATCGACAACACGCTGCAGACCA CCCAGCAGGCTCCTGCACAGCAGGCGTCCCGCCAGGAAGCACCGTCGGTCAACTACCGTGACCTGGATCGTCCTACCGTGATGCGCAACCAGGCACACGC AGGCGCTACAGCCGCGGCGAAGATGAACCCTAACGATGATCTTGATTACCTGGACATCCCGGCTTTCCTGCGTCGTCAGGCCGATTGATGAAATGTATCA GGGGTATTAGGGTGATTGGTGTTCAGCAAAGGCATGGTCTGCTATCATCGCCAGCCTTTGTTGATACCAGTTCGCAACTTGCGCTGAAGCGGCCCATGCC
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| DNA Sequence for Gene |
>PSS41A_RS08340
ATGATAAAACAACGCACCCTGAAAAATATTATCCGTGCCACAGGTGTAGGCCTGCACTCCGGGGAGAAGGTTTACCTGACCCTCAAGCCCGCACCTGTGA ATACCGGCATTGTGTTTTGCCGAGCTGACCTTGATCCCGTCGTGCAGATCCCTGCGCGTGCGGAAAACGTCGGTGACACCACTCTGTCGACCACTCTGGT CAATGGTGATGTCAAAGTCGACACGGTAGAACACTTGCTCTCGGCCATGGCTGGCCTTGGCATCGATAACGCCTACGTCGAGCTCTCTGCCTCCGAAGTT CCTATCATGGACGGCAGCGCAGGCCCTTTCGTATTCCTGATTCAATCGGCAGGCCTGGAAGAACAGGACGAGCCGAAGAAATTCATCCGTATCCTGCGTG AAGTCACAGTGGAGGAGGGCGGTAAACGCGCTACCTTCGTGCCTTTCGAAGGGTTCAAGGTCAGTTTCGAGATCGATTTCGATCACCCCGTCTTCCGTGA CCGCACCCAGAGTGCAAGCGTGGACTTTTCCAGCACTTCCTTCGTGAAGGAAGTCAGCCGTGCCCGGACCTTCGGGTTCATGAGTGATATCGAGTACCTG CGCAAGCACAACCTCGCACTCGGCGGCAGCGTGGAAAACGCCATCGTGGTCGACAAGGACGGTGTACTGAACGAAGACGGCCTGCGGTACGAGGACGAAT TCGTCAAACACAAAATCCTCGACGCCATCGGTGACCTCTACCTGCTGGGCAACAGCCTGATTGGTGAGTTCCGGGGTTTCAAATCGGGGCATGCACTGAA CAACCGTCTGCTGCGCACGTTGATCGAGCAGAAAGACGCTTGGGAAGTGGTGACTTTCGAGGATGCCAGTACGGCACCTATTTCTTACATGCGTCCTGTC GCGGCGGTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAAGCTTTACTCTCTTTCCTTTTGTTCTTTAAAGGCTGCCCTCGGGTGGCCTTTTTTTATGGATTTTTTTAGGGAAAGTCAGTGCGCGCGGAGGGCTTG AAGCGATGGGGCAGAGTTACTTCCTGTCCTTCGCATGGCTGGCCAGCCGTTCCAGTGCGGCGCGCAAGCGCGGATCGGTGATGCCTTCAGCGGTGGCCTG AATGTTTTCGGCAGCCACTGCCGACAGGTCGATCGTGTGCGTGGCGGCTCCGCGTGGCGCTTCAGGCGGCTGCACCTTGAACACAATGCGGGTCAAGTTG ATGAATTCGTCGAAGGCCATCATTTGCCGGTGCAGGCGTTTCTGCTGGTAGCGCAGGCGCGTGGCCCAATGACCATCCGTCACGATCAGCAACAAGGTAC CTTCGCGCCACGATGCCACGCGACAATGCTCGCGGGCCGCAGGTTGCAGCTGGCTTTCGAGCAGGCGCTGCAAGTGGCTGAGTCGCTCGGCGTGGCGAAA
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| Amino Acid Sequence |
>UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
MIKQRTLKNIIRATGVGLHSGEKVYLTLKPAPVNTGIVFCRADLDPVVQIPARAENVGDTTLSTTLVNGDVKVDTVEHLLSAMAGLGIDNAYVELSASEV PIMDGSAGPFVFLIQSAGLEEQDEPKKFIRILREVTVEEGGKRATFVPFEGFKVSFEIDFDHPVFRDRTQSASVDFSSTSFVKEVSRARTFGFMSDIEYL RKHNLALGGSVENAIVVDKDGVLNEDGLRYEDEFVKHKILDAIGDLYLLGNSLIGEFRGFKSGHALNNRLLRTLIEQKDAWEVVTFEDASTAPISYMRPV AAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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