Strain | Pseudomonas syringae CC1557, complete sequence. [Details] | |
DNA Sequence Upstream of Gene |
TATTTCCGGCGCGACCATTCTGGGCGATGGCCGTGTGGTGCTGATTCTGGACCTCATGGCGCAGATTCGAACCTTGCAGGGCCTGCCGTTCCGAGGGCTG ACGCCTGTCTCGTACAGCGAAGTCGAGCACGCCCGGCCGCTGCTGGTGATGGTCGTGGACGATTCGGTGACCGTGCGCAAAGTCACCAGCCGCTTGCTCG AACGGCACGGCATGCACGTGCTGACCGCCAAGGACGGGATAGACGCCATGAGCTTATTGCAGGAACACACCCCCGACATCATGTTGCTGGACATCGAAAT GCCGCGCATGGACGGTTTTGAAGTCGCCAGTCAGATTCGTCAGGATGAAGAACTCAAGGGGCTGCCGATCATAATGATCACCTCTCGCTCCGGCCAGAAA CACCGTGACAGGGCCATGGCGCTGGGTGTCAACGAGTACCTGAGCAAGCCTTATCAGGAAACCGTGTTGCTGGAGAGCATTGCCTACTGGAGTCAGGTCC
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DNA Sequence for Gene |
>N018_RS23170
ATGTCTGAAGGTACGTTCCAGACCAGCCGTCTCACCAGCCTGACCGGGCTGTTGTTGCCGCTGAGCGACCGCCATCTGCTGGTGCCGAACGTCGCGGTTG CCGAGTTGATCGACTATCAGGATTGCAGTGCCGGTCCGGACGCCCCCGAATGGTATCTGGGGCCGATCAGCTGGCGCGAACTGACCTTGCCGCTGCTCAG CTTCGAAGCCGCCTGCGGAGGACGCACACGGGTCGGAGGCCGAGCCCGAATCGTAGTGCTCAATGCGCTCGGCGGACGCAACGAGGTCCGCTTCCTGGCG CTGCTGACCCAAGGCATCCCGCGTTCCTGCAAAGTCGATAGCCAGCTGAGCTACGTCGACGTGCCATTGGCCGAACTGGAGCTCGCCGCCGTACAGATAG GTGAAACCGTCGCCCGCATCCCCGACCTGGAAGGGCTGGAGCAGTGGTGGGTGGACACGGGGCTTGTGCTCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGTTGATTTCCGGACACCTCTCGACCGGACGCAGAGCGTCGCACGATAGCTGAGGTTATCGCGCCGGCTTGGGAATGCCCTGGGTGACGCTCCGCGTCAC AAATCTGCGCCACGCTGCGCACTCAAGAGCGGACGCAGAGCGTCCAGAACGGCATGCCCACGCGGAGCATGGGCACGATAGTGTTCTACGCCTATCGTTC CTCACGCTCCATGGGCACTACGGGTGTGTGGCCCTCACGACGAGCAACTGATCTCCAGATGCTTGCCCCAGTCCGGTGGGCGCTGGGCGTAGCCTTGCAT GTCGGGTTGTTCGGTGAAGGGGTTGCAGAGCACCTGGTGCAGGCGACGGACTTCTGCGTAGTCGCCTTTTTCAGCTGCTTCGATGGCGTTCTGCGCCAGG TAGTTGCGCAGGATGTACAGTGGATTGACCGCGTGCATGCGGGTCTGACGGTCCTCCTCGGTGCCGTTGTCTTCGCGGGCGATACGCGCCAGATACGTTT
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Amino Acid Sequence |
>chemotaxis protein
MSEGTFQTSRLTSLTGLLLPLSDRHLLVPNVAVAELIDYQDCSAGPDAPEWYLGPISWRELTLPLLSFEAACGGRTRVGGRARIVVLNALGGRNEVRFLA LLTQGIPRSCKVDSQLSYVDVPLAELELAAVQIGETVARIPDLEGLEQWWVDTGLVL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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