Pseudomonas syringae CC1557, N018_RS16270

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae CC1557, complete sequence. [Details]
DNA Sequence Upstream of Gene
ACAATAAGGCTGGCAGTCTGGGTGTGTCCGTCGGTTTCAATACGAAACAATTGCCGGTGTTCTCGCTGTGGAAAAACACTGACACCAAAGGCCAGGGTTA CGTGACCGGGCTGGAGCCAGGCACCAGCTTCTCCTATAACCGCCGCTTCCAGCGCCCGCTGAATCTGGTGCCGACCATTGCGCCGAAAGAGCAACGTCAG TTCCAGATCAGCTACAGCCTGCTGGCTGACAAAGGTGCGGTCGACAAGGCTCTTGGGCAGATCAAGACCATTCAGGACGGGCGCGAGACCGAAGTCCGCA AAGAACCGCTGGTCGACCTGACCAAAGAGCAATAAGGGTTATCTGAGGTTTTTCAGCAACGTTTCCAACGCAAGGCCGGGGTTTGACGTAAGCGATTACG TCGAAATCCGGCCTTGATTCGTTCAGGCTGAAAAATTTACCCAACACTTGCGACTCTCGCCTGTCTACACCCTCTCAACCCTTCAAAGACGAGCATGAAT
DNA Sequence for Gene
>N018_RS16270
ATGAAAATCCTGATGGTTTTGACTTCCCATGACCAACTGGGCGACACCGGCAAGAAAACCGGTTTCTGGCTCGAAGAGTTTGCAGCACCGTACTACGTGT TCAAGGATGCCGGTGCTGAGGTCACGCTGGTTTCGCCTGCTGGCGGTCAACCGCCGCTTGACCCGAAAAGTGATGAACCTGACGCACAGACGCCTGAAAC CGAGCGTTTCGCCAAAGATACCGATGCCCAGAAAGTGCTGGCCACTACTGGTCGCCTGGCTGACGTCAACGCTGCCGATTTCGATGCTGTGTTCTATCCG GGCGGTCACGGCCCGCTGTGGGACTTGGCCGAAGACAAGCACTCGATTGCCCTGATCGAAGCCTTCGCGGCGGCAGACAAGCCACACGGTCTGGTGTGCC ATGCACCCGGCGTGCTGCGTAAAGTCAAAGCGCAGAATGGCGAGCCACTGGTCAAAGGCCGACGCGTCACTGGCTTTACCAACAGCGAAGAAGAAGCCGT CGGCCTGACCGATGTCGTGCCTTTTCTCGTCGAAGACGCTCTGAAAGACCTGGGCGGCGATTACTCCAAGGGCGATGACTGGAGCGTTCACGTATTGACC GACGGCAAGCTGGTCACCGGGCAGAATCCGGCCAGCTCTGCGCAGGCGGCCAAGGACGTGCTGACCTTGCTCGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCGGTTTGCGCGGCTCGGTGCCTGGAAATACTGCACCGGACCGCGCGTCATATAAATCGAATCTTGCTGATCCACTACAGCCCAATATCCAGATAGCCC ATCACTCTGGAGAACAGTCATGAAAGATGAATCCCAACGCGAAGACCTCGATCACAAGCCGGAAAACGCTGGCAAAGTAGGAGAGAAGAACAAAGCGCTC AATCAGCAGGGCGAACAGACGCGGCCTGCTACCTCCCCCGACCCGCAGAAAGACAAGTCCTGACAGGCTCGAAAAACGGCGTTCAGCGCATTGGCACGAG AGTCAGTCAGAATGTGTACAGCGGCGAGCGCCTGGCACGACTCAGAGCAGACCGCGCTCTGCACACACCTTGACGATCTGCTCACGCAGCCAGGCGCTGG CCTCCTCCTGGTCAGCCTGCCCGCTCCAGACCATGTCCAGACTGAAACCCGGCAAGTCCGGCGGCAGTTCGAAAACCGAAATCCAAGGCTCATTGCCCAG
Amino Acid Sequence
>dimethylallyltransferase
MKILMVLTSHDQLGDTGKKTGFWLEEFAAPYYVFKDAGAEVTLVSPAGGQPPLDPKSDEPDAQTPETERFAKDTDAQKVLATTGRLADVNAADFDAVFYP GGHGPLWDLAEDKHSIALIEAFAAADKPHGLVCHAPGVLRKVKAQNGEPLVKGRRVTGFTNSEEEAVGLTDVVPFLVEDALKDLGGDYSKGDDWSVHVLT DGKLVTGQNPASSAQAAKDVLTLLG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site