Pseudomonas syringae CC1557, N018_RS14080

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae CC1557, complete sequence. [Details]
DNA Sequence Upstream of Gene
AGTGAAGTTTGTGTGCGGCTTAACGAGAGCGACTGCCGGGTCTCGGTGGTCAGCGGTTCGGTACAGGTCCATCCGTTGCGAGGCTCTGCGCTGGTCGTGC AGGCGCACCAGCAGATCAGTCTGCAACGAAGCGGCGCAGGACCGGTTACGGCCTTCGACGCGCAATTGCCCGGCTGGCGTGACGGCGTGCTGACTGCGCA GAACCAGCCGCTGGGCACTTTTCTGCGCGAACTCAGCCGATACCGCCCCGGTCTGCTGCGCTGGGAACACGAGCTTGAAGCCTTGCGGATAACCGGCAGT TTTCAGCTCGATAACACTGATCGGGTCCTGTCGCTGCTGGCCGCCAGTCTGCCGGTAGAGATCCACATGCGTACCCGCTATTGGGTCACTCTGGCCCCTC GCAAAAACACACCACAAAAAAATAACGCGTGAAGCCTGTCCCTTTTTTTCGTCTCACTGGTCATTACAGGTAGTGAACAAAATTACGAGAGCTTCCCTTT
DNA Sequence for Gene
>N018_RS14080
ATGTCTGCAGTTTCTCCCCATCGTTTACGTCCGCTTTTGCATTTCAGTCTGTTGCTGACCCTGAGCTCCAGTCCGCTGTTCATCTCGACCAGTTGGGCCG ACACCGCGACCAGACGCGCCTATGAAGTACCGGCTGGCACCCTGAGTGCAGCGTTGACCCGGTTTGCCGGGCAGGCCGGCGTCAACCTGTCGGTAGACCC TGCGCTGGTGAATGGACGCAACAGCGCCGGGCTGTCGGGCGACTTTGCAGTCGAAGAAGGCTTTGCGCGACTGTTGCAGGGCTCCGGTCTGCAACTGGTA TCCGTTGGCGATCAGGCGTACACGCTGATTCCTGCTGTTCAAAGCACGAGCATGCAGCTGGCGCCGACGTCGATTGTCGGCGACGGCGGCTCCACCGACG GTCAGGAATATGCAGGCGGTCAGGTTGCGCGCAAAGGCTCGCAAGGCATGCTCGGCGCGCGGGATTTCATGGAAACGCCGTTCAGCATGACCACCTACAC CAAGGATGCGGTGAAAAACCAGCAGGCCCGCACGTTGGGCGACTTGATTGCCAGTGATCCGTCGGTGCGCTCCACCAACCCGGCGGGCGGGCGTTATGAA CAGTTCACCATTCGTGGTTTCAGCCTGTTCAACAGTGACGTTTCCTACAACGGTCTTTACGGCATTCTGCCTACCTACACCATCGATATGGAAATGGCCG AGCGGGTCGACATCCTCAAGGGGCCGAGCCAGATGATCAACGGCATCTCGCCGCGCGGCAGTGTCGGCGGCGGGATCAACGTGGTGCCGAAACGGGCGAC CGACAAGCCCATCACCGAATTCACCACCAGCTATGCCTCCAAGGGGCAGGTCGGTGCCGCAGTCGATGTGGCTCGCCGGTTTGGTGAAGACGACAAATTC GGTATTCGTTTCAACGGCGTGAAGCAGTCTGGCGATACCGAGTGGGACCATCAGAGCGTTGATCGCGATATGGCCGTGCTTGGCCTGGATTTTCGCGGCG AGCGTTTGCGCCTGTCGACCGATATAGGTCACACCGAACGTGACACCGACGCACCGCAGGAGCGCGTGCAGGTCGGCGCCAATGCCAAAGTACCCAATGC CAACGATGTGCGCGACAACTATGCGCAGGCCTGGAGCAAGGCGCGCACCCGGGACACCTTCGGTGCGGTGAATGCCGAGTACGACGTCAATGACTCGGTC ATGCTCTATGGCGGTGTCGGTGCGCGGAAAAGCAACCATGATTTCCTGCGCCATGCGGTGTCGGTGACCAACGATGCGGGCGATTTCAGCGTACAGCCAC GCGACTTCACCCGTGACGAAAATGTCCGGACTGCCAACGTCGGGGTGCGCAACTGGTTTCATACCGGGCCGGTCAGTCACGAGGTCAATCTCGCTGCCAG CTACTTCTATATGGACTTCGAGAATGGCGGCGCACGCTATGCCTCCTCGCCGAGCAACCTGTACGACCCGATCGAGACGCCGACCCCCTCGAATCCGACT CGATCTGACTCCAAGGTCTATACCGAAAACCGTTTCAGCGGTGTGGCCTTGACCGATACCATGGGCTTCTTCGATGACCGCCTGCTGCTGACGCTTGGTG CCCGCTGGCAGCGGGTCAAGGTTGATGACTGGACTGACAACGTCAAGGGAGACACGGCTTACGACGAGGAGAAAGTCTCGCCTTCAGGTGGCATTCTGTA CAAGGTTACCGACGACTTCTCGGTGTACGCCAACTACATGGAAGGTCTGAGCCAAGGCAAGATCGCGCCGTCGACCTCTGTGAACGAAGACGAGATATTC CCGCCGTTTGTCAGTCGTCAGGTTGAAGTCGGTGCCAAGTATGATCTCGGATCGTATGCGTTTACCGCCAGTGTGTTCCGTATCAAGCAACCGGCTTACG AGACCAATACCACGTCGCGGGTCTTCGGCCCGAATGGCAAACGTCAGAATGACGGTGCCGAGCTGACCATGTTCGGCGAACCCCTCAAAGGCTTCCGCCT GCTGGGCGGGGTGATGTACATCGACAGCAAGCTGACCAATACCGTCAACGGTCAGTTCGATGGCAACCGTGCACCTGCCACGCCCGAATACAACGTCAAC CTGGGTGCCGAATGGGACGTGCCGCAGGTCAAGGGCCTGACCCTGACCGGGCGGGGCATCTACACCAGTTCGCAGTATCTGGATCAGGCCAACAGCAAAA GTATCGACTCTTCCGAGCGTTTCGATGTGGGTGCACGTTACGCCTTCAAGGTCGACCAGAAGGACATCACACTGCGAGCTAATATCGAAAACGTCATGGA CAAGCGTTACTGGGCCTCCGCCGGAGCCTCGGATGACAGCGAGCCCGGCTTGACGCTGGCGACCCCGAGGACCTACCTGCTGTCAGCAACCATCGGTTTC TGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATACAGTTGATTGCCCGGCCCAGGGAAGGGCCGCAGGGTGGACATATCACACTTGGCCAGTCCTTTATGAGGGATAACCTGTATACATAAATAGCTGAAT ACGTAGAGCGTAACTGAATAAAGACTTAACAGAACTGCTGTTGGCAGTGGCTGTTTATCCCTTGAAGCGCTCATTTAATTAATGGCACTTTGAATAACTC CGATGAAAACTTCGGGGCTTTCGCGCACCCGAAACGTTATAAGTTATTTATTTTAGTTTCATGTTTTTTTTCGACACAACAGGTTGCACTTTTGACTGAA TGATAATAGTTTGCATCCCGAACTTAGCGAGGGTTAACTGATGTTGAATGATGGCTTATTGCACTCTACTACGTCGCCGAAAACCAATGCCAACTACCTG GACCGACAGAGCAAGTTTGAATCCAATGTACGAAGTTATCCGCGCAAGTTGCCGTTGGCGATTGCCAAGGCACATGGCGTTTGGGTAACGGACGTTGAAG
Amino Acid Sequence
>TonB-dependent receptor
MSAVSPHRLRPLLHFSLLLTLSSSPLFISTSWADTATRRAYEVPAGTLSAALTRFAGQAGVNLSVDPALVNGRNSAGLSGDFAVEEGFARLLQGSGLQLV SVGDQAYTLIPAVQSTSMQLAPTSIVGDGGSTDGQEYAGGQVARKGSQGMLGARDFMETPFSMTTYTKDAVKNQQARTLGDLIASDPSVRSTNPAGGRYE QFTIRGFSLFNSDVSYNGLYGILPTYTIDMEMAERVDILKGPSQMINGISPRGSVGGGINVVPKRATDKPITEFTTSYASKGQVGAAVDVARRFGEDDKF GIRFNGVKQSGDTEWDHQSVDRDMAVLGLDFRGERLRLSTDIGHTERDTDAPQERVQVGANAKVPNANDVRDNYAQAWSKARTRDTFGAVNAEYDVNDSV MLYGGVGARKSNHDFLRHAVSVTNDAGDFSVQPRDFTRDENVRTANVGVRNWFHTGPVSHEVNLAASYFYMDFENGGARYASSPSNLYDPIETPTPSNPT RSDSKVYTENRFSGVALTDTMGFFDDRLLLTLGARWQRVKVDDWTDNVKGDTAYDEEKVSPSGGILYKVTDDFSVYANYMEGLSQGKIAPSTSVNEDEIF PPFVSRQVEVGAKYDLGSYAFTASVFRIKQPAYETNTTSRVFGPNGKRQNDGAELTMFGEPLKGFRLLGGVMYIDSKLTNTVNGQFDGNRAPATPEYNVN LGAEWDVPQVKGLTLTGRGIYTSSQYLDQANSKSIDSSERFDVGARYAFKVDQKDITLRANIENVMDKRYWASAGASDDSEPGLTLATPRTYLLSATIGF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site