Strain | Pseudomonas syringae CC1557, complete sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACACCGCGCACTAAAATGCCGACCGGCATCAGGCCTGATCCACCGAACGTTCAACCCGACGCGCCCCTGGTGGTCGGGCTGGGCTGTCGGCGCGGTTGTT CGGCGGCGACCTTGCGTGAGCTGATCGAGAACAGCCTCCGCGCGATTGATCTGGAGATCGGCAGCGTCACCGCGCTGGCGTCCATTGACCTGAAAGATCA GGAACCCGGTCTGCTCGAACTGGCCAGGCAACTGGCGGTGCCACTGGTGTTCTTCAACGCCGCGCAACTGGTGGCGTGGGAGCTGCATCTGACGCACCGC TCTGCGCAGGTCTTGCAGACCACCGGCTGTCACGGTATAGCCGAAGGTTCGGCGCTGGCACTGGCCGCACAGCTGGGCAACGGCACAGCGCGGCTGGTCA TCGAGCGGCAGAAAAGCACTCAGGTGACATTTGCCTTGGCAACCTGCCCCATTGCGGGCGGATAATTGCAGCACTCGCGTATTCATTTCCGGAGAATTCA
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DNA Sequence for Gene |
>N018_RS11240
TTGACCGTCTATTTCATTGGCGCAGGTCCTGGCGATCCCGAGCTGATCACCGTCAAGGGCCAGCGTTTGATTCGCACCTGTCCGGTGATTATCTACGCGG GCTCGCTGGTGCCGCTGGCCGTGCTGGAAGGTAATCAGGCGCTGCAAGTGACCAACAGCGCCGAGTTGCATCTGGAGCAGATCATTGATCTGATCAAGGC CGCTGATGCACAGGGCCAGGACGTGGCCCGCGTACATTCCGGCGACCCGAGCCTGTACGGCGCCATTGGCGAGCAGATTCGTCATTTGCGGGAATTGGGT ATTGCGTACGAAATCATCCCCGGCGTGACCGCCACTGCGGCCTGTGCTGCACTATTGGGCGTTGAGCTGACGCTGCCGGATGTTTCCCAGAGCGTTATTC TGACCCGTTACGCCGACAAGACCTCGATGCCGAGTGGCGAAGCGCTGGCGAGCCTCGCCAGCCACAGGGCGACCATGGCAATTCATCTGGGGGTGAAAAA CCTGCAGCGGATTGTCGAAGAGCTGACCCCGCATTACGGTGCCGACTGCCCGATAGCAGTGGTACACCGCGCCAGTTGGCCGGATCAGGACTGGGCGCTC GGTACGCTGGCAGACATTCAGGAGAAAGTGCAGGCCAAGGGCTTTCGGCGTACCGCGCTGATTCTGGTCGGCCGCGTGCTTGCTGCCGATCATTTCAGTG AGTCGTCGTTGTATCGGGCCGGGCATGCACATTTGTTCAGGCCTGAATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CAGATGACTCTCGTGCCGCTCGGCGTTACACACGTACGCTTTTGATTCTGACCTTAGGCCGTAGGGGCGAACCTGTTCGCGAAAAGGCCGGTATGAAAGT CGGAAATGCGTCGTCTGAAACGATGTCTTCGCGAACAGCAAGGAGCGTGGGAACGGGAAAGCATTCCCACGGAGCGTCCAGAACGGCATGCCAACACTTG AGCATTGTCGCGAAATCAACCAGTAGCAGGACGCTCACCTCATCAAGCAGCCACCTCATACAGCTTCGGCGCGACCCTTTCGCCGCTTTCCAGGCTTTTG CGCAGGATATCTGCCTGCAAAGCCGCAGCTTTCATGGCATTTTCCTTGATGTAGCCATAACCGCGGATCTTTTCCGGCAGACGCGCCAGGCTCAACGCTG TGTGGCGGTTGTGGGCCTGAAGATGTTGCAGGATCAGTTCGATATCGCTGACGTAGCGGTCGATCAGCTCCCTCTCCTGCCTGCGCTCGAGGCTGCGACC
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Amino Acid Sequence |
>precorrin-4 C11-methyltransferase
MTVYFIGAGPGDPELITVKGQRLIRTCPVIIYAGSLVPLAVLEGNQALQVTNSAELHLEQIIDLIKAADAQGQDVARVHSGDPSLYGAIGEQIRHLRELG IAYEIIPGVTATAACAALLGVELTLPDVSQSVILTRYADKTSMPSGEALASLASHRATMAIHLGVKNLQRIVEELTPHYGADCPIAVVHRASWPDQDWAL GTLADIQEKVQAKGFRRTALILVGRVLAADHFSESSLYRAGHAHLFRPE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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