Pseudomonas syringae CC1557, N018_RS08170

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0009306	protein secretion	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR34040	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR34040	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	psyr02040	Flagellar assembly	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00952	Type III secretion system inner membrane Q protein family signature	IPR002191	Bacterial export protein family 3	39	54	6.5E-15
PIRSF	PIRSF004669	FliQ	IPR002191	Bacterial export protein family 3	1	89	5.1E-26
PRINTS	PR00952	Type III secretion system inner membrane Q protein family signature	IPR002191	Bacterial export protein family 3	18	39	6.5E-15
PANTHER	PTHR34040	FLAGELLAR BIOSYNTHETIC PROTEIN FLIQ	IPR002191	Bacterial export protein family 3	1	88	2.0E-24
Pfam	PF01313	Bacterial export proteins, family 3	IPR002191	Bacterial export protein family 3	6	77	2.0E-26
PRINTS	PR00952	Type III secretion system inner membrane Q protein family signature	IPR002191	Bacterial export protein family 3	54	76	6.5E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.