Pseudomonas syringae CC1557, N018_RS08155 (fliN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae CC1557, complete sequence. [Details]
DNA Sequence Upstream of Gene
AGTACATCAATTCGGAAGTGAACCCGGCCATGGCCAACATCGTAGGGCCAAGCGAGGCAGTGGTGATCTCGACGTTCCACATCGAACTCGATGGCGGTGG CGGTGATCTGCACGTGACCATGCCGTACTCGATGATCGAGCCAATCCGCGAAATGCTCGATGCCGGCTTCCAGTCGGACCTCGACGATCAGGACGAGCGC TGGGTCAATGCGCTCAAGGAAGACGTGCTGGATGTCAGCGTGCCATTGACGACTACCATTGCGCAGCGTCAGTTGCCATTGCGCGACATTCTGCACATGC GTCCCGGCGATGTGATTCCGGTAGAGTTGAGTGAATCGCTGGTCCTGCGTGCCAACGGCGTGCCTTCATTCAAGGTCAAGCTTGGCTCGCACAAGGGCAA GATGGCCCTGCAAGTAATCGAACCCATAGCACGACGTTGACCTGTCAGGTCAACGTCGGAAATTTTGCGTAACTGAAAGACTGTGTGCAGAGGACAACTG
DNA Sequence for Gene
>N018_RS08155 |fliN
ATGGCTGATGAAAACGATATGACGTCTGCTGAAGATCAGGCACTGGCCGATGAATGGGCTGCTGCACTGGGCGAGGCCGGCGACGGCGGGCAAGCGGACA TTGACGCGTTGCTGGCTGCGGACGCCGGGAATTCGGGTAGCCGTCTGGCCATGGAAGAATTTGGCAGCATGCCGAAGAGCACCGGCCCGGTCACCCTGGA TGGTCCGAACCTGGACGTGATTCTGGACATCCCGGTATCGATCTCCATGGAAGTGGGCAGCACCGATATCAACATTCGCAACCTGTTGCAGCTCAACCAG GGCTCGGTGATCGAGCTGGATCGTCTGGCGGGCGAGCCACTGGATGTGCTGGTCAATGGCACGCTCATCGCTCACGGTGAGGTGGTGGTGGTCAACGAGA AGTTCGGCATCCGTCTTACTGACGTGATCAGCCCGAGCGAACGCATCAAGAAGCTGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATGAAGCGCTGGCTGAGTGTACTGTCGACCCTGCCATCGCTGGCCTGGGCCGCCGAGCCCGCTGTTCAGGCGGCCCCGGCGCAAGTGGCCAGCACCGTTT CCGGGGGCATGGGCGGGCAGTTGGTGCAATTGCTGTTCGGCCTGATCCTGGTGGTCGGCCTGATTTTCGTGCTGGCCTGGCTGATGCGCCGGGTACAGCG CGTCGGTCCGAACAACAGTCAGGTCATCGAGCTGGTGAGTTCGCGTGCCCTTGGGCCGCGTGATCGTCTAGTGCTGGTGCAAATTGGCACTGAGCAGGTA TTGCTGGGTATTACGCCGGGTCGAATCACGCCCCTGCATGTACTCAAGGAGCCGGTACACGTGCCGGTGCGCGAGCAGACGACGCCCGAGTTCGCTCAGC GTCTGATGGAGCTGATGGGCAAGGATAAGGACAAGAAGTAATGGGCGCCTTGCGTTTCCTGATACTGCTGTTGCTGGTCATGGTGGCGCCTTCCGTTCTG
Amino Acid Sequence
>flagellar motor switch protein
MADENDMTSAEDQALADEWAAALGEAGDGGQADIDALLAADAGNSGSRLAMEEFGSMPKSTGPVTLDGPNLDVILDIPVSISMEVGSTDINIRNLLQLNQ GSVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site