Strain | Pseudomonas syringae CC1557, complete sequence. [Details] | |
DNA Sequence Upstream of Gene |
AAAGTCTTCGGCAGCCTGGGCATGACCCTGCTGTTCCTGGTCGGTCAGGGAATCTACCTGTCACGCCACCTGCACGATACCGCTCCCAACACGACCAAAT CCGAGGACTGACATGCTCTACGCAATCATCGCCACTGACGTCGAAAACTCGCTGGAAAAACGCCTGAGCGTTCGTCCTGCACACCTTGAGCGCCTGAACG CACTCAAGGATGCAGGCCGTCTGGTACTGGCCGGCCCACATCCGGCAATCGAGAGTAATGATCCGGGCGCTGCCGGTTTCAGCGGCAGCCTGGTGGTTGC CGAGTTCGACTCGCTGGACGCCGCAAAAACCTGGGCCGATGCCGACCCATACGTTGCAGCAGGCGTTTACGCCAATGTCGTGGTCAAGCCGTTCAAGCAA GTCATGCCCTGACCCGCGCCTGGCCAACCCCTATGCAGCGCTGCCTTTCGATCAAGGCCGCGCTGCGCTGCATTCTGGCAGTGGCTAAATTGAGTGAGTC
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DNA Sequence for Gene |
>N018_RS07345
ATGAGCGAGCTGTTACTGATAGATGATGACCAGGAGCTGTGCGAGCTGCTGAGCAGTTGGCTGAGCCAGGAAGGCTTTCAGGTACGCGCCTGCCACGATG GCTCCAGCGCACGCAAGGCATTGGCCGATGCAGCGCCCTCTGCGGTGGTACTGGACGTGATGCTGCCCGACGGCAGCGGCCTGGAGCTGCTCAAACAGTT GCGTTCCGAGCACCCGGACCTGCCGGTGGTAATGCTCTCGGCACGTGGCGAGCCGCTGGACCGCATACTTGGCCTGGAACTGGGCGCTGACGATTATCTG GCGAAACCCTGCGACCCCCGCGAGCTGACCGCCCGCTTGCGTGCTGTACTACGCCGCAGCCATCCGGTTGCTTCGTCGACGCAACTTGAGCTGGGTGACC TGACCTTCAGCCCGGTGCGTGGTGTGGTCAGTGTCGATAACAAGGAGCTGACCCTCACCGTGTCCGAGAGCCGTTTGCTTGAGGCGCTGATGCGCCAGCC CGGCGAACCGCTGGACAAGCAGGAACTGGCGCAACTGGCCCTGGGCCGCAAACTGACCCTTTACGACCGCAGCCTGGACATGCACGTCAGCAACCTGCGC AAGAAGATCGGCCCGCACGCCGATGGCCGCCCACGCATCGTCGCCCTGCGCAGCCGCGGGTATTATTACGCTCTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCAGCTTCAAGCTTTAAGCGACAAGCTGTAAGCAAACATCAGAGTGCTTCTGGCTTGAAGCTGACAAAACTTGCCGCTGCCCCTTACACAAGCTTTACGT ACCGCTGACCGTGCTTGACCTTGTTCTCCCTAAACTGGGCTCATCGGCATTGAGCCGCACTAGAGACAAGGAGATACACCATGCGTAAGACCCTGATCGC TTTGATGTTCGCAACTGCCCTGCCTACCATTGCCATGGCCGCACCGCCACCGCCACCACCGGGCGGCCCTGACGCAGACGTGCCAGCCATGCGTCTTGAT CGTGATGATCGAGGCCCTGGGCCCGACATGCGTCGCGGCCCGATGGGTGAGCGAGGCCCAGGTCCGGAAATGCGCCGTGGCCCAGGCCCTCTTGGAGATC TGGACCTGAGCCGTGAACAGCGCCAGCAGATCGACAGGCTGATGCGTGAGCAGAAGCACGAACGCCACGACATCACTCAACGCTATCTGGACAAAATGCC
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Amino Acid Sequence |
>chemotaxis protein CheY
MSELLLIDDDQELCELLSSWLSQEGFQVRACHDGSSARKALADAAPSAVVLDVMLPDGSGLELLKQLRSEHPDLPVVMLSARGEPLDRILGLELGADDYL AKPCDPRELTARLRAVLRRSHPVASSTQLELGDLTFSPVRGVVSVDNKELTLTVSESRLLEALMRQPGEPLDKQELAQLALGRKLTLYDRSLDMHVSNLR KKIGPHADGRPRIVALRSRGYYYAL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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