Pseudomonas syringae CC1557, N018_RS05845
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae CC1557, complete sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGATCAGGGTCAGGCGCAGCTAAGCAAGGCGGTCAACGCTGCGCTGCAATTGCTGGCTGTGCGCCTGGAGCAGTCGGGACTCACCCTGCACCGGGCCTTC GTCGACGCGACTCTGACCATCGACCAGACCCGCCTGGAGCAGATTCTGGTCAACCTGATCGGCAACGCGCTGGACGCCATGTCCGCCCAGCCACAGCCCG AATTGTGGCTCGAAGGGTCAGTCGTCGATAGCCGCTATCGCCTGCTGGTGCGAGACAATGGGCACGGTATCGACGATGAAGCGCGCAAGCACCTGTTCGA ACCCTTCTTCACTACCAAACCGGGCGAGCAAGGCCTCGGTCTTGGCCTGACGCTGTCAGCGAGCCTTGCCGCCGCAGCGGGAGGCAGCCTCGGCGCAGAA CCTGTGGGTGACACGGGCACGACGTTTGTTCTGTGCCTGCCATTCATCCCGGACGCGCCGACCGATTCTCGCCAGGGCGAGCCCACATAAAGGAATATCC
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| DNA Sequence for Gene |
>N018_RS05845
ATGAGCATCAACAGCGACCTGACGGTACTGATCGTCGAAGACGACCCGCACGTATTGCTGGGCTGCCAGCAGGCGCTGGCTCTGGAGGACATTGCCAGTG AGGGCGTGTCGAGTGCCGAAGAGGCCCTGCAGCGCATTGGCGACAACTTCGCGGGCATCGTCATCAGCGACATCCGCTTGCCGGGCATTGACGGCCTGGA GCTGTTGAGCCGCCTCAAGGCACGCGACAGCAGCCTGCCGGTGGTGCTGATCACCGGTCACGGCGATATCACCATGGCCGTCAATGCGATGCGCGACGGT GCATATGACTTCATGGAGAAACCGTTTTCGCCCGAGCGTCTGGTCGACGTCACCCGCCGGGCTCTGGAACAGCGTGGCCTGGCCCGCGAAGTCTGGTCCT TGCGCAAGCAACTTGCCGAACGCGACTCGCTGGAGGGCAGAATCATCGGCCGCTCACCGGTCATGCAGAACCTGCGTGCGCTGATCGCCAACGTCGCCGA CACCTCGGCCAACGTGCTGATCGAAGGCGAAACCGGTACCGGCAAGGAACTGGTCGCTCGCTGCCTGCACGACTTCAGTCGCCGCAAGAACAATCAGTTC GTGGCCCTCAACTGCGGCGGGCTGGCAGAAAGTCTGTTCGAATCGGAAATATTCGGTCACGAAGCCAACGCTTTCACCGGCGCGGGCAAGCGGAGGATCG GCAAGATCGAACATGCTCATGAGGGCACCCTGTTTCTCGATGAAGTGGAGAGCATGCCGATCAATCTGCAGATCAAGCTGTTGCGCGTCTTGCAGGAACG GACGCTGGAGCGCTTAGGCTCGAATCAAAGCGTGGCAGTGGATTGCCGGGTGATCGCAGCGACCAAATCCGACCTGAATGCGCTGGGCAAGACCAATCAG TTCCGTAGCGACCTGTATTACCGCCTCAACGTCGTCACCCTGGAACTGCCGCCGTTGCGCGAACGCCGCGAAGACATTCTTCCGCTGTTCGAACACTTTT TGCAGTTGTCGTCATTGCGCTTCGACCGCGAGCCGCCGCCGCTGGACCGGCAGACCGGCTCAAGCCTGATGAGCCATGACTGGCCGGGCAACGTGCGGGA ACTGCGCAACGTCGCAGAGCGATTTGCCCTGGGCCTGCCTGCGTTCAAGCAAAGCGGTACGATCAGCGAAAACCAGAGCCTGGGCTTTGCCGAGGCGGTT GAAGCCTTCGAGCGTTCACTGCTCAGCGAAGCCTTGCAACGCAGCGGGGGCAACCTGAGCCAGGCCAGTCAGGAACTTGGCATGGCCAAGACCACGCTGT TTGACAAGGTCAAAAAGTACGGGCTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGCTCGGTTTATCTGTGACGCAGAGCGTCACGCAGGGCAGTCCACTGGAGCGTGCTGAACGATAATCTCAACTATCGTGCGACGCTCCGCGTCCGCCCTT GAGCAGGCAGCGAGCTTTACTTCGATTCGCTGACAATCTGCCGGATAGCACTAACGAACACGTCAACCGGCTGCCCGCCCGATACCGCGTACTGATCATT GAAGACCATGGTCGGGACAGAAGTGATGCCACGCGAGGTCCAGAGTTGTTCGGCTTCGCGAACTTCAGTGGTGTACTCATCGCTGTCCAGAATAGCCTGG GCACGCAGTCGATCCAGACCCACCTTCTGTGCCACGTCCGCGAGGGCCTGGTGATTCGAAGGGTCTTTCAGCTCACTGAAATAAGCCACGAACAGCGCCT CCTTCAACGCGTGCTGCTTGCCTTCCTGCTCGGCCCAGTGCAGCAGACGATGCGCATCGAATGTGTTGTAGATACGTCGCCCGCCGCTGGCAAACGCAAA
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| Amino Acid Sequence |
>Fis family transcriptional regulator
MSINSDLTVLIVEDDPHVLLGCQQALALEDIASEGVSSAEEALQRIGDNFAGIVISDIRLPGIDGLELLSRLKARDSSLPVVLITGHGDITMAVNAMRDG AYDFMEKPFSPERLVDVTRRALEQRGLAREVWSLRKQLAERDSLEGRIIGRSPVMQNLRALIANVADTSANVLIEGETGTGKELVARCLHDFSRRKNNQF VALNCGGLAESLFESEIFGHEANAFTGAGKRRIGKIEHAHEGTLFLDEVESMPINLQIKLLRVLQERTLERLGSNQSVAVDCRVIAATKSDLNALGKTNQ FRSDLYYRLNVVTLELPPLRERREDILPLFEHFLQLSSLRFDREPPPLDRQTGSSLMSHDWPGNVRELRNVAERFALGLPAFKQSGTISENQSLGFAEAV EAFERSLLSEALQRSGGNLSQASQELGMAKTTLFDKVKKYGL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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