Pseudomonas syringae CC1557, N018_RS04760 (groEL)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00118
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0042026 protein refolding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02348
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0140662 ATP-dependent protein folding chaperone
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02348
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psyr03018 RNA degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.560.10 - IPR027413 GroEL-like equatorial domain superfamily 6 522 0.0
PRINTS PR00298 60kDa chaperonin signature IPR001844 Chaperonin Cpn60/GroEL 83 110 6.5E-74
Hamap MF_00600 Chaperonin GroEL [groEL]. IPR001844 Chaperonin Cpn60/GroEL 2 546 40.871967
SUPERFAMILY SSF54849 GroEL-intermediate domain like IPR027410 TCP-1-like chaperonin intermediate domain superfamily 137 203 5.26E-23
FunFam G3DSA:3.50.7.10:FF:000001 60 kDa chaperonin - - 192 373 1.2E-86
Gene3D G3DSA:3.50.7.10 GroEL IPR027409 GroEL-like apical domain superfamily 192 373 0.0
NCBIfam TIGR02348 JCVI: chaperonin GroEL IPR001844 Chaperonin Cpn60/GroEL 3 526 0.0
PRINTS PR00298 60kDa chaperonin signature IPR001844 Chaperonin Cpn60/GroEL 27 53 6.5E-74
Gene3D G3DSA:3.30.260.10 - IPR027410 TCP-1-like chaperonin intermediate domain superfamily 137 410 0.0
FunFam G3DSA:1.10.560.10:FF:000001 60 kDa chaperonin - - 6 202 1.3E-66
SUPERFAMILY SSF48592 GroEL equatorial domain-like IPR027413 GroEL-like equatorial domain superfamily 7 521 4.25E-74
Pfam PF00118 TCP-1/cpn60 chaperonin family IPR002423 Chaperonin Cpn60/GroEL/TCP-1 family 23 523 6.2E-92
PANTHER PTHR45633 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL IPR001844 Chaperonin Cpn60/GroEL 2 529 0.0
SUPERFAMILY SSF52029 GroEL apical domain-like IPR027409 GroEL-like apical domain superfamily 184 376 3.66E-82
PRINTS PR00298 60kDa chaperonin signature IPR001844 Chaperonin Cpn60/GroEL 350 375 6.5E-74
PRINTS PR00298 60kDa chaperonin signature IPR001844 Chaperonin Cpn60/GroEL 268 291 6.5E-74
CDD cd03344 GroEL IPR001844 Chaperonin Cpn60/GroEL 4 523 0.0
PRINTS PR00298 60kDa chaperonin signature IPR001844 Chaperonin Cpn60/GroEL 398 419 6.5E-74

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.