Pseudomonas syringae CC1557, N018_RS04440

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae CC1557, complete sequence. [Details]
DNA Sequence Upstream of Gene
ATCAAACTGGCAGTCTTCGATGTGGATGGCGTACTGACTGACGGCCGTCTGTATTTCATGGAAGACGGCAGCGAGATAAAGACATTCAACACGCTGGACG GGCAAGGCATAAAAATGCTGATCGCCTCAGGCGTGACCACAGCCATCATTAGTGGCCGTAAAACAGCGATAGTCGAGCGCCGGGCGAAGAGCCTGGGCAT CGCACACCTTTTTCAAGGCCGCGAAGATAAACTGGTCGTCATGGACCAATTGCTGGCAGAGTTGAAACTGGGTTACGAACAAGTCGCCTATCTGGGTGAC GATCTGCCAGACTTGCCAGTCATTCGGCGTGTCGGTCTGGGCATGGCCGTTGCCAATGCGGCAAGTTTTGTACGCGAGCATGCACACGGAATAACAACGG CGCGAGGCGGCGAAGGTGCGGCACGCGAATTCTGCGAACTGATTCTGAGTGCGCAAGGCAACCTTGAAGCGGCCCACTCTGCTTATTTATAGAAGCCATT
DNA Sequence for Gene
>N018_RS04440
ATGTTCACTAAAAAAATTCGGAAGTTCCTGCTTCTCGGGGTACTGGCGGTGCTGCTGGCGGCCGTCGGCTACTGGAATGTCAGCCCTGAAAGTTTCATGG ACAGGCCTGACGGGACGGTTAACGACACCGCGATCGACTACTATGCGCTTAATACGCGAAGTGTTCAGTACCTGCCAGACGGCACACTTCAATACGACAT GACCGCCGACAAGGTGGAGCACGTGAAGGCCTCTGATGTAAGCCTGCTGACCACGCCCGATCTGAACATGTATCGCGGCGGTGAGTTTCCCTGGCATGTG CAGAGTAAAAGAGGCGAAGTGTCGTCCGCCGGCGATCAGGTCGAGTTGATGGACTCCGTTCGCGTTGAACGCACCGATGAAAAACAACGTACGACTATTA TCACCAGCAGTCGCATGACCGTATTCCCGCAGAAGCAATATGCGGAGACCGACCAAGACGTTAGAATCGACGGCGCGGGCGGTGTCACTACGGCCAAGGG AATGAAAGCGTATTTGAAAGACAGCAGGATGGACCTGCTATCCAACGTAAGAGGACAGTATGAGGCTCGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACTCTTCCTTTATTGCTCGGCCTGGGCGCAGCACTGGGAAGCGCGAGCGCCTGGTCCCTGCCAACCGACCGTGATCAGCCTATCCACATCCAGTCTGAC GATGCTCAGCTTGATGACAAGAAAGGCGTTGCAACCTACAGGGGCAACGTCGTCATCACGCAAGGCTCGATGAAGGTCACCGGCAACACCGTGACGATTA CCCGTAACGCCCAGGGCGAAGTCGATGTGTTCACCTCTGTCGGCAATCTGGCTTACTACGAGCAGAAACCGGCCCCGGACAAGCCGATCGTGCAGGCCTA CGCCGTCACGATCCAGTATTACGCCGGCCAGGACCGCATTGTCCTGATCGACAAGGCCAAGGTCATCAACGACGGCAACACGTCGGAAGGCGAGAAAATC GTCTACGACACGGTCAGACAGGTCGTCAGTGCTGGCCGGGCCAATGGCGGCACCAAGTTGACTACGCCACGTCCGCGTATCGACATGGTCATCCAGCCGA
Amino Acid Sequence
>LPS ABC transporter permease
MFTKKIRKFLLLGVLAVLLAAVGYWNVSPESFMDRPDGTVNDTAIDYYALNTRSVQYLPDGTLQYDMTADKVEHVKASDVSLLTTPDLNMYRGGEFPWHV QSKRGEVSSAGDQVELMDSVRVERTDEKQRTTIITSSRMTVFPQKQYAETDQDVRIDGAGGVTTAKGMKAYLKDSRMDLLSNVRGQYEAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site