Pseudomonas syringae CC1557, N018_RS04280

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae CC1557, complete sequence. [Details]
DNA Sequence Upstream of Gene
CGGCCTGTTGGAAACGTTTCTCCGGAAGCGCTTCCCTGAAATAAGGATTGCCCACATGGCACTCAGCGTTGAAGAAAAAGCTCAGATCGTAACCGACTAC CAGCAAGCTGTTGGTGACACTGGTTCGCCAGAAGTGCAAGTTGCACTGCTGACCGCCAACATCAACAAACTGCAAGGCCACTTCAAGGCCAACGGTAAGG ACCACCACTCCCGTCGTGGTCTGATCCGTATGGTAAACCAGCGCCGCAAGCTGCTGGATTACCTGAAAGGTAAGGACGTTAGCCGTTACAGCGCCCTGAT CGGTCGTCTGGGTCTGCGTCGCTAATAACGACGTTGCTAGAGGTTGGTTGTCTGTCACGATCCATCGGGTTTGCCCGGTGGTTCTGGCAGGCTCCCAGCC TCAAGTTTTATCTGGGCTGTGGAAGGGGCCGATTCCCCACGCTGCCCAAGAATTCGCAAGAAACCAGTTCCCCAAGAGCCACAAAGAAAGGTAGGAAACC
DNA Sequence for Gene
>N018_RS04280
GTGAACCCGGTAATCAAAAAGTTTCAGTTCGGTCAATCGACCGTAACCCTCGAGACAGGCCGTATCGCCCGTCAAGCCTCTGGTGCAGTATTGGTCACCG TTGACGACGACGTCAGCGTACTTGTGACTGTGGTCGGCGCCAAACAGGCTGACGCTGGCAAAGGCTTCTTCCCTCTGTCCGTGCACTACCAGGAAAAAAC CTACGCTGCCGGCAAGATTCCCGGTGGTTTCTTCAAGCGTGAAGGCCGTCCTTCCGAGAAAGAAACCCTGACCTCGCGACTGATCGACCGTCCGATCCGT CCGCTGTTTCCAGAAGGCTTCATGAACGAAGTGCAGGTTGTCTGCACCGTCGTTTCCACCAGCAAGAAAATCGATCCGGACATCGCTGCGATGATCGGTA CATCGGCTGCTCTGGCCATCTCCGGTATCCCGTTTGACGGTCCGGTCGGCGCTGCGCGCGTTGCTTTCCACGAAAGCACCGGCTACCTGCTGAACCCGAC CTACGAGCAGTTGCAGGCTTCAAGCCTGGACATGGTTGTAGCCGGTACTTCCGAAGCCGTTCTGATGGTTGAATCGGAAGCCAAGGAACTGACCGAAGAC CAGATGCTGGGCGCCGTACTGTTCGCCCACGACGAATTCCAGGTGGTCATCAACGCCATCAAGGAACTGGCCGCCGAAGCCGCCAAGCCTACTTGGGACT GGCAGCCGAAGCCTGAAGCGACTGCACTGCTGGGCGCTATCCGTGCCGAGTTCGGCGATGCGATCTCCCAGGCTTACACCATCACCGTCAAAGCCGACCG CTATGCGCGTCTGGGCGAACTGAAAGATCAGGTCGTTGCCAAGCTCGCTGTTGAAGACGGCAGCCCGTCTGCCAGCGAAGTCAAAGCCGCTTTCGGTGAA ATCGAATACCGCACCGTTCGCGAAAACATCGTTAACGGCAAGCCACGTATCGATGGCCGCGACACGCGCACCGTCCGTCCTCTTAACATCGAAGTCGGCG TTCTGCCAAAGACTCACGGCTCGGCACTGTTTACCCGTGGCGAAACTCAGGCGCTGGTTGTGGCCACCCTGGGTACTGCACGTGATGCACAGCTGCTCGA TACCCTTGAAGGCGAGAAAAAAGACCCCTTCATGCTGCACTACAACTTTCCTCCGTTCTCGGTGGGCGAGTGTGGTCGCATGGGCGGTGCCGGTCGTCGT GAAATCGGTCACGGTCGTCTGGCTCGTCGCAGCGTGCAGGCTATGCTGCCGGGCGCTGACGTGTTCCCGTACACCATTCGTGTTGTTTCGGAAATCACCG AGTCCAACGGTTCCAGCTCCATGGCCTCGGTCTGCGGTGCTTCCCTGGCACTGATGGATGCAGGTGTTCCGATGAAGGCGCCGGTTGCCGGTATCGCCAT GGGTCTGGTCAAGGAAGGCGAGAAGTTCGCCATTCTGACTGACATCCTGGGTGACGAAGATCACTTGGGCGACATGGACTTCAAAGTAGCTGGTACCTCC AAAGGTGTTACCGCGCTGCAGATGGACATCAAGATCAAAGGCATCACCGAAGAGATCATGGAGATCGCCCTGGGCCAGGCTCTGGAAGCTCGCCTGAACA TCCTCGGTCAGATGAACCAGATCATCGGTCAGTCGCGTAACGAACTGTCGGCCAACGCGCCGACGATGATCGCGATGAAGATCGACACCGACAAGATCCG TGACGTGATCGGCAAGGGTGGCGCAACCATCCGTGCAATCTGCGAAGAAACCAAGGCTTCGATCGATATCGAAGACGACGGCTCGATCAAGATCTTCGGC GAATCCAAGGAAGCGGCTGAAGCGGCACGTCAGCGCGTTCTGGGTATCACCGCAGAAGCAGAGATCGGCAAGATCTACGTCGGCAAGGTTGAGCGCATCG TCGATTTCGGCGCATTCGTCAACATCCTGCCGGGCAAGGACGGTCTGGTTCACATCTCGATGCTGAGCGACGCTCGCGTAGAGAAAGTGACCGATATCCT GAAAGAAGGTCAGGAAGTCGAAGTACTGGTACTGGACGTGGATAACCGCGGTCGTATCAAGCTGTCGATCAAAGACGTAGCGGCTGCGAAAGTATCCGGC GTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTGATCTGATCAGCGTTTGAAAAAGGACTCTTCGGAGTCCTTTTTTTATGTGCGCAATTAAAGGGTTAGGTTTCGGTCGCGCAAAATGCTCGGTCTGAAC ATGCATCTTGCAAGCCTGAAACCGGGTTAGCGGGCAATCTGCACGATTCCGTAAATTAGCCGAAAATATAACTATATGATTTTAAACGGATTTTAAGGTT CTTCATGTTTGGCACAGCGATTGCGACATAACGGTTAACCCTGCAGCCATTCACCTGGCGCAGTTTTTGAGAAAAACAGGAGTTATCGTATGAAGAAGTT CGCTATCGCTGCCGCTACCGCAACTGCCCTGACTCTGACCATGGCTAACGCTGCATTCGCTCAGACCTCGGCTCAAGCGCCAATGGTTCTGGCAGCTAAC ACCACGACTCAAGAAGTCAAAGAAGATACTTCTGACACCTGGATCACTACTAAAGTCAAAGCTGACCTGCTGACTGAAAAAGGCATTCCTGGTTCGGACA
Amino Acid Sequence
>polynucleotide phosphorylase/polyadenylase
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADAGKGFFPLSVHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIR PLFPEGFMNEVQVVCTVVSTSKKIDPDIAAMIGTSAALAISGIPFDGPVGAARVAFHESTGYLLNPTYEQLQASSLDMVVAGTSEAVLMVESEAKELTED QMLGAVLFAHDEFQVVINAIKELAAEAAKPTWDWQPKPEATALLGAIRAEFGDAISQAYTITVKADRYARLGELKDQVVAKLAVEDGSPSASEVKAAFGE IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTARDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRR EIGHGRLARRSVQAMLPGADVFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAILTDILGDEDHLGDMDFKVAGTS KGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQIIGQSRNELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG ESKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARVEKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKVSG V
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site