Pseudomonas syringae CC1557, N018_RS02235

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae CC1557, complete sequence. [Details]
DNA Sequence Upstream of Gene
CGCTCGGAAAAAAATCGGTTGTGAACAGTTTTCGCGCTAAAAGGTGGCAGCCGCAAAGCTGTGTGTGCGAAAACCGCGCAGTGCCCAAAAATGGATGCCC GGCATGGCTCCTCGCCAGCGAATACTCTCCGAAAAATGAACTTGTCGGGCATACCTCCCTCCAAAGGTCCGCGTTCGCGCAGGCTCCGACCTGCCAACCA ACGCTGCCGACACACGCAGCGACTGCGTAACGTACTGGCCGTTTTTCAGCTGTTCCGACGCTGCAACCGGGCGCTTGTACGATGCAATCAATCTGTAAGC GACCTTGCGCACACTGGATGCGACGCCGCCTGCACTGGATACGACGCCCCCAGTAGGCGTTTGTCTATCCCTGTTAGATGATCGGTTCCGACTCGATCGC CCGGCGTAGTGATGGAGCTTCGCGAAAGGCCCTGCCATCCCATAAGCCGCGTCAGCGTTCACCTGCTGACGACCAGAAAAAAATTCACAGGAGTCCACCC
DNA Sequence for Gene
>N018_RS02235
ATGAAAGGTTCCAAATCGTTGCTCTTGGCCGCCACGCTCTGTATGCCGGTGCTTGCCCAGGCAGCCGAGCCAGAGGCCTGTCATACGGTCAACTTCTCCG ACGTAGGCTGGACTGACATTACTGTCACCACCGCGGTGACCAGCGCGGTACTTGAATCGCTGGGCTACAAGACCAAGACCACCATGATTTCCGTACCCGT GACCTACAAGTCGCTGGCAGACGGCAAGAACATGGACGTTTTCCTCGGCAACTGGATGCCGACCATGGAAAACGACATCAAGCCTTATCGCGAAGCCGGA ACGGTCGAGACCGTGCGCGCCAACCTGGAAAACGCCAAATACACCCTGGCCGTTCCGCAAGCGCTCTACGACAAGGGTCTGCATGACTTCGCCGACATCC CCAAATTCAAGAAAGAGCTGGGCGGAAAGATCTACGGCATCGAGCCTGGCAACGACGGCAACCGTCTGATCCAGAGCATGATCGACAAGAATGCTTTCGG CCTGAAAGATGCAGGCTTCAAGGTAGTGGAATCCAGCGAAGCCGCGATGCTGTCGCAGGTCGACCGCGCCGTGAAGCGCAAGAACGACGTCGTGTTCCTC GGTTGGGAACCGCACCCGATGAACACCCGCTTCAAGATGAAATATCTGACTGGCGGTGATGACTTCTTCGGCCCGAACTATGGCCAGGCGACGATCTACA CCAACACGCGCAAAGGCTACAGTCAGGAATGCAGCAACGTAGGCCAGTTGCTCAAGAACCTGTCCTTCACACTGGACATGGAAAGCACCCTGATGGGCAA TGTACTGGACGACAAGATCAAGCCTGATGCCGCCGCCAAAGCGTGGATCAAGAAGAACCCGCAGGTGCTCGACACCTGGCTCGCAGGCGTGACAACGGTT GATGGCAAACCTGGTCTGGAGGCAGCCAAGGCCAAGCTGACCCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGACAGCAGGCGGGCCTGCCCCGCCTGTTGCCCTCTCCACCTTCCGCAAGCGGATATCCGATACCATGCTGATTGATCAAAAAATCCCTCTGGGCGAG TACATCGCCGCGTTTGTCGACTGGTTGACGGCCAACGGCGCCGACTACTTCGACGCGATTGCCTCGACACTGGAAATGATGATCCACGGATTCACCTTCG CGCTGACCTGGTTCAATCCGTTTGTATTGATCGGCCTCATTGGCGCGCTCGCGCACTTTATCCAGCGCAAGTGGGGCCTGACGGTTTTCGTCATTCTTTC ATTCCTGCTGATCCTGAACCTGCATTACTGGCAGGAAACCATGGAAACCCTGGCGCAAGTGCTATTTGCCACCCTGGTCTGTGTCGTCATCGGCGTGCCG CTGGGCATCATTGCCGCGCACAAACCGCTGTTCTACACGATCATCCGCCCGTTGCTCGACCTGATGCAGACCGTTCCCACCTTCGTTTATCTGATCCCGA
Amino Acid Sequence
>glycine/betaine ABC transporter substrate-binding protein
MKGSKSLLLAATLCMPVLAQAAEPEACHTVNFSDVGWTDITVTTAVTSAVLESLGYKTKTTMISVPVTYKSLADGKNMDVFLGNWMPTMENDIKPYREAG TVETVRANLENAKYTLAVPQALYDKGLHDFADIPKFKKELGGKIYGIEPGNDGNRLIQSMIDKNAFGLKDAGFKVVESSEAAMLSQVDRAVKRKNDVVFL GWEPHPMNTRFKMKYLTGGDDFFGPNYGQATIYTNTRKGYSQECSNVGQLLKNLSFTLDMESTLMGNVLDDKIKPDAAAKAWIKKNPQVLDTWLAGVTTV DGKPGLEAAKAKLTQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site