Strain | Pseudomonas syringae CC1557, complete sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCACTCTGGTGGTGCGCAACGGCGTGGCCAGCAACCCGGACCTCAAGGTGCGTACGCCGGGCATGGCAGTCAACGGTAACGGTGACGTCGACCTGCGCGT ACTGGGCATGAACTACCGCGTCGGCATCATCGTCGAGGGCGACAAGAGCGACATGCCGGACCCGGCCTGCGAGATCAACCCGCGCTTCGTCGGTATCGAG TGGCCGGTGCAGTGCCGTGGCCCGCTGGAGCTGGGTGCCAAAGCCTGCCGCCTGGACAAGGAAGGCGTCGGTCAGATCGCCGCAAAACTGGCGGGCGACC GAATCGGCGAGAAGCTTGAGGACAAGCTGAACGAGAAACTGGGCGACAAGGTGAGTCCCGAGTTCAAGGACGCCCTGAAAGGGCTGTTCAAACGCTAGCC GATGGCGGATTGCCCAGGAGCGCCGATCACGGCGCTCCTGAGCCACTGACGCTTGGCAATAAAAGACTTTCACATTCCGACGACGAGAGCCCTCCAGGCC
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DNA Sequence for Gene |
>N018_RS00965
ATGCAACCTGAACAATTCTCCAGCGCCGTGCTGGACTGGTACGACCGTCATGGCCGACACGACTTGCCCTGGCAACAAGGCATCACGCCCTATCGGGTCT GGGTATCGGAAATCATGCTGCAACAGACCCAGGTAAGCACCGTCCTGAACTACTTCGAGCGCTTCATGGAGGCCCTGCCGACCGTGCAGGCGCTGGCTGA CGCGCCTGAAGACGAAGTGCTGCACCTGTGGACCGGGCTGGGTTACTACACCCGCGCCCGTAACCTGCAAAAGACCGCAAAAATCGTCGTCGCCGATCAC GACGGCGAGTTTCCCCGCGACGTCGAAAAACTGATTCTGCTGCCCGGTATCGGCCTGTCCACCGCAGGCGCAATCGCCAGCCTGAGCATGGGTATTCGTG CGCCCATCCTGGATGGCAACGTCAAACGGGTGCTGGCGCGCTTTACCGCGCAAGAGGGCTATCCCGGCGAACCCAAGGTCGCCAAACAACTGTGGGCCAC CGCCGAGCGCTTCACACCGCACAGCCGGGTCAACAACTACACACAGGCAATGATGGACCTCGGCGCCACGCTCTGCACCCGCAGTAAACCCAGCTGCCTG CTTTGCCCGCTGGAGCGCGGCTGTCAGGCGCACATGCTGGGCCTGGAAACCCGCTACCCGATCCCCAAGCCACGCAAGACCGTCCCGCAGAAGCGCACGC TCATGCCAATGCTCGCCAACCGCGATGGCGCGATTCTGCTCTACCGTCGTCCTTCCAGCGGCTTGTGGGGCGGACTGTGGAGCCTGCCGGAGCTGGACGA CTTTGCAGACCTGAAGCACCTGGCAGCACAACACGCATTGGAACTGGGCGAACACCACGAACTGCCGGGCCTGATCCACACCTTCAGCCACTTCCAGTTG AGCATCGAGCCCTGGCTGATCGAAGTCCAGGAGTCAGCCGATCACGTGGCCGAGGCCGACTGGCTCTGGTATAACCTCGCCACCCCGCCACGCCTGGGCC TTGCGGCCCCGGTGAAAAAGCTGCTCAAACGCGCAGCCGACGTATTGAACGCAGGAGAGTCGTCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCGCACCGTAATGTGCCGCAAATACAAAGAAGAACTGCCTGGCCTGGAACGCGCCCCATACCCTGGCGCCAAGGGTGAAGACATCTTCAACCACGTTTC GCAGAAAGCCTGGGCCGACTGGCAGAAACACCAGACCCTGCTGATCAACGAGCGTCGCCTGAACATGATGAACGCCGAGGACCGCAAATTCCTCCAGACC GAGATGGACAAGTTCCTCTCAGGCGAAGAATACGCCCAGGCCGAAGGCTACGTTCCCCCCGAAAAATAAAGCCTTTCACGCGGTGAAGGTCGTAAGCGTC GGTAATAATTCAATTTTTTGAAAAAACACGCTTGACGACCTCCTGAAAAACACGTTTAATGCGCCCCGTTGCCCAGATAGCTCAGTCGGTAGAGCAGGGG ATTGAAAATCCCCGTGTCGGCGGTTCGATTCCGTCTCTGGGCACCACCTTTCGTTTTCAGGTGATGCCAAGCACACCTGAAAACACACAAGAAGCCCGCC
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Amino Acid Sequence |
>adenine glycosylase
MQPEQFSSAVLDWYDRHGRHDLPWQQGITPYRVWVSEIMLQQTQVSTVLNYFERFMEALPTVQALADAPEDEVLHLWTGLGYYTRARNLQKTAKIVVADH DGEFPRDVEKLILLPGIGLSTAGAIASLSMGIRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPHSRVNNYTQAMMDLGATLCTRSKPSCL LCPLERGCQAHMLGLETRYPIPKPRKTVPQKRTLMPMLANRDGAILLYRRPSSGLWGGLWSLPELDDFADLKHLAAQHALELGEHHELPGLIHTFSHFQL SIEPWLIEVQESADHVAEADWLWYNLATPPRLGLAAPVKKLLKRAADVLNAGESS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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