Pseudomonas syringae CC1557, N018_RS00715
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae CC1557, complete sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGGTTTTCTGGGGGTTGGTCTGGCCTGATCAGGAGGCCGACACGTTACAAAGCCAGACACTGCGCTTAGACTTGAGTCGGGTTTGTTTTCCTGGGGCA AGTCCACCAATTCGGGAGAAAGTTTTCATGAAGCTAGTCACTGCCATCATCAAGCCGTTCAAATTGGATGACGTGCGCGAGTCGTTGTCTGAAATCGGCG TGCAGGGCATCACCGTTACCGAGGTCAAAGGCTTCGGGCGTCAGAAGGGTCACACTGAGCTGTATCGCGGTGCTGAATACGTTGTCGACTTTCTTCCAAA GGTGAAGATCGACGTCGCCATTGATGACAAGGATCTGGATCGCGTCATCGAGGCCATAACCAAAGCCGCCAACACCGGCAAGATCGGTGACGGCAAGATT TTTGTGGTCAATCTGGAACAGGCCATTCGCATCCGTACCGGCGAGACCGATACAGACGCTATTTAAGCCGCCAAACCCCAACGCCCCAGGAGAAAACAAT
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| DNA Sequence for Gene |
>N018_RS00715
ATGACTCTGCGTCAATTCGCAGGGCTCGGTGCCCTGTTGTCCCTAGCAATACCTGGTCTTGCCCTGGCGGCTGATCCAGTGGCCGAGCCGGTGCTGAACT CTGGCGACACCGCATGGATGCTGACGGCGACCGCTCTGGTCCTGTTCATGACCATTCCCGGCCTCGCGCTGTTCTACGGCGGCATGGTCCGCTCGAAAAA TATTCTTTCCGTGATGATGCAGTGTTTCGCTATTACCGGTCTGATCAGCATTCTGTGGGTCGTCTACGGCTACAGCATCGCGTTCGACACCACCGGTATG GAAGCGGGCGTCGTCAACTTCAATTCCTTCTTTGGTGGTATGGGTAAAGCGTTTCTGGCGGGTATCACGCCGGCAAGCATTACCGGTCCTGCTGCATTGT TCCCTGAGGCGGTGTTCGTCACCTTCCAGATGACCTTTGCGATCATCACGCCTGCTCTGATCGTCGGTGCTTTTGCAGAACGCATGAAGTTCTCCGCGAT GCTGATCTTCATGGCCATCTGGTTCACGCTGGTCTACGCGCCGATTGCCCACATGGTCTGGGGCGGCGTCGGTGGTCTGTTGTGGGACTGGGGTGTTCTG GACTTCGCTGGCGGCACCGTGGTGCATATCAACGCTGGTGTAGCCGGTCTGGTAGCCTGCCTGGTACTCGGCAAGCGCAAAGGCTTCCCAACCACGCCGA TGGCTCCGCACAATCTGGGTTACACCCTGATTGGCGCCGCAATGCTCTGGGTTGGCTGGTTTGGTTTCAACGCCGGTTCCGCTGCTGCAGCCAACGGCAC TGCCGGTATGGCGATGCTGGTCACTCAGATCGCGACGGCTGCTGCTGCGCTGGGCTGGATGTTCGCCGAGTGGCTGACGCACGGTAAGCCAAGTGCGCTG GGCATCGCGTCGGGTGTGGTTGCCGGTCTGGTTGCCATCACCCCGGCTGCCGGTACTGTCGGCCCGATGGGTTCTCTGATCATCGGTCTGGCTGCAGGCG TGATCTGCTTCTTCTGCGCCACCAGCCTGAAACGCAAGCTTGGCTACGACGATTCCCTGGACGCCTTCGGTGTACACGGTATCGGCGGTATCGTCGGCGC GATCCTGACCGGCGTGTTTGCAGCCCCGGCCCTGGGCGGCTTCGGCACCGTGACTGACATCGGCGCTCAAGTCTGGATTCAGTTCAAGGGCGTCGCGTTC ACCGTCGTTTACACCGCTATCGTGACCTTCATCATCCTCAAGGTGCTGGATGCCGTGATGGGTCTGCGTGTCACAGACGAGGAAGAGTCTGTCGGTCTGG ACCTTGCGCAACACAACGAGCGTGGCTACAACTTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAGCAGCCCGCAAAAAAGAAATGCCCGGTATCCGGGCATTTTTTTTGTCTGGCGATTTGTGGATAAACTCTGTGTTTTTGCTGTCATTGATCTTGCCCG CGTCAATGATCCCGGCTCCTGACGCAGCGCAGGTGACGTGGTTGCGGACGGTGATGTGAGCGTCGTTGAAAGAAGTGTGACGAGCATTGCCACGAAGGTC TTCGTCAGCTTGCAGGGAAGCCGGTTTATTGCGCGCTTTGCTTTTTTCTCAGTCGAGTTAGAATGCGCGCCGAAGGTGCGGAGAACGGTATGTGGCATCA GTCCAGAATCGCCTTGCGGGCCAGGCCTCGAGGGTTTCATCTGGTTTCCGACGAAATACAGACAGGTCTGCCCCCGTTGCGGAATTGTCGTGTCGGATTG CTACACTTGTGGCTGCAACATACCTCGGCGTCGTTGACCGTCAACGAAAATGCCGACCCGGCGGTGCGTCGTGACTTCGAGCGTTTCTTCAACCGTCTGG
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| Amino Acid Sequence |
>ammonia channel protein
MTLRQFAGLGALLSLAIPGLALAADPVAEPVLNSGDTAWMLTATALVLFMTIPGLALFYGGMVRSKNILSVMMQCFAITGLISILWVVYGYSIAFDTTGM EAGVVNFNSFFGGMGKAFLAGITPASITGPAALFPEAVFVTFQMTFAIITPALIVGAFAERMKFSAMLIFMAIWFTLVYAPIAHMVWGGVGGLLWDWGVL DFAGGTVVHINAGVAGLVACLVLGKRKGFPTTPMAPHNLGYTLIGAAMLWVGWFGFNAGSAAAANGTAGMAMLVTQIATAAAALGWMFAEWLTHGKPSAL GIASGVVAGLVAITPAAGTVGPMGSLIIGLAAGVICFFCATSLKRKLGYDDSLDAFGVHGIGGIVGAILTGVFAAPALGGFGTVTDIGAQVWIQFKGVAF TVVYTAIVTFIILKVLDAVMGLRVTDEEESVGLDLAQHNERGYNL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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