Pseudomonas stutzeri SLG510A3-8, AB691_RS20800
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain SLG510A3-8, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGCATCAACGTCACGTTCAAGCCGGCCACCGGCAACGCTCAGGAAGAGGTCGAGCTGCCCCTCAAGCTGATGGTGCTGGGCGATTTCACCCAGCGCGCCG ACGACCGCAAGATCGAAGACCGCAAGCCCATCGCCATCGACAAGAACAGCTTCGACGAGGTCCTGGCCAAGCAGGAGCTGAACCTGACCTTCGGCGTGCC GAACCGCCTGCAGGACGAGCAGACCGATGACGAGTTGGCCGTGCAGCTGCGCATCAACTCGATGAAAGACTTCAATCCGGCAAACCTGGTCGAGCAGGTC CCGGAGCTGAAGAAACTGATGGAACTGCGCGACGCCCTGGTCGCCCTGAAGGGTCCGCTGGGCAACGCTCCGGCCTTCCGCAAGGCCATCGAAAGCGTAC TCGCCGATGACGACTCGCGTGACCGCGTACTCGGCGAACTGGGCCTGGCGGCCAAAGAGAAGCTGGACGCCTGATATCACCGACAAGGAAGCACATCTAC
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| DNA Sequence for Gene |
>AB691_RS20800
ATGACCACTAGCGCAGCCGCCGTCGAGCACGGCAATCACCTCGCCGAAGGCGGCATTCTCGACCGCATCATCGCCGAAACCCGCCTGACCCCGGACGACG AGGCCTACGACATCGCCAAGCGCGGCGTATCGGCCTTCATCGAGGAACTGCTCAAGCCGCAGCACGAAAACGAGCCGGTGAAGAAGGCGATGGTCGACCG CATGATCGCGGAGATCGACGCCAAGCTCAGCCGGCAGATGGACGAAATCCTTCACCACCCACAGTTCCAGGCGCTGGAGTCCTCCTGGCGTGGCCTGAAG CTGCTGGTGGATCGCACCAACTTTCGCGAGAACATCAAGCTCGAACTGCTCAACGCCTCCAAGCAAGACCTGCTAGACGACTTCGAGGACAGCCCTGAAA TCGTCCAGTCCGGCCTGTACAAGCACATCTACACGGCCGAGTACGGCCAGTTCGGTGGCCAGCCGGTCGGTGCGCTGATCGCCAACTACTTCTTCGATCC CAGCGCGCCCGACGTCAAGACCATGCAGTACGTCGCCAGCGTCGCGAGCATGTCCCACGCGCCGTTCATCGCCGCTGCCGGCCCGAAATTCTTCGGCCTG GAAAGCTTCACCGGCCTGCCGGACCTGAAGGACCTCAAGGATCACTTCGAGGGCCCGCAGTTCACCAAGTGGCAGAGCTTCCGCGAACAGGAAGATGCCC GCTACGTCGGCCTGACCGTCCCGCGGTTCCTGCTGCGCAATCCGTACGATCCGGAAGACAACCCGGTGAAGAGCTTCGTCTACAAGGAAAACGTCGCCGG CAGCCACGAGCACTACCTGTGGGGCAACACCGCCTACGCCTTCGCCAGCCGGCTGACCGACAGCTTCGCCAAGTTCCGCTGGTGCCCGAACATCATCGGG CCGCAGAGCGGCGGCGCAGTGGAAGACCTGCCGCTGCACCATTTCGAAAGCATGGGCGAGATCGAGACCAAGATCCCGACCGAAGTGCTGGTTTCCGACC GGCGCGAGTACGAGCTGGCCGAGGAGGGCTTTATCGCCCTGACCATGCGCAAGGGCAGCGACAACGCGGCGTTCTTCTCCGCCAACTCGGCGCAGAAGCC GAAGTTCTTCGGCAACAGCGAGGAAGGCAAGACCGCCGAGCTGAACTACAAGCTCGGCACCCAGCTGCCCTACCTGTTCATCGTCAACCGCCTGGCGCAC TACCTGAAGGTGCTGCAGCGCGAGCAGATCGGTGCATGGAAGGAGCGCACCGACCTCGAACTGGAACTGAACAAGTGGATCCGCCAGTTCGTCGCCGACC AGGAGAATCCGAGCTCCGAAGTACGCAGCCGTCGTCCGCTGCGCGCCGCCCAGGTCAACGTCAGCGACGTCGAGGGCGAGCCGGGCTGGTACCGCGTCAG CCTCAGCGTGCGTCCGCACTTCAAGTACATGGGCGCGGATTTCACCCTGTCGCTGGTTGGCAAGCTGGACAAGGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCACTTGAACGGATACGGCAGCCTCTTCGAACGCCTCGGCGGTGACGCCGCGCGACGTTCCGGCTGGAGCCGCGAGGTCGCGGCGATGGCCTCGGTGGCT GCCCATCTGGCCAAGATGCTCAGCACCCGAGCGGGCAGCGTGCAGACGCTGCCCGACTACGGGTTGCCAGATCTCAACGATATGCGCCTGTCGCTGCACG ACTCGCTGCAGCAGGCGCGTATCGCCATCGAGCGCTTCATCGAAGCGTACGAACCCAGGTTGACCCAGGTGCGCGTGCTGTCGCTGCCGCGAACCCACGA CCCGCTGACCCTCGCCTTCATCATCGAAGGCCTGCTGGAAGTGGATGGCCTCAAGCGCCAGGTCAGCTTCTCCGCCAGCCTGGATGGCAGCGGGCAGGTC AAGGTCCAGTAAGGAGACAACGGATGTCCGGCAAACCCGCAGCTCGCCTCGGCGACCCTACCGCCTGCCCGAAGACGGGCCACGGCACCAACCCCATCGC
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| Amino Acid Sequence |
>type VI secretion protein
MTTSAAAVEHGNHLAEGGILDRIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQHENEPVKKAMVDRMIAEIDAKLSRQMDEILHHPQFQALESSWRGLK LLVDRTNFRENIKLELLNASKQDLLDDFEDSPEIVQSGLYKHIYTAEYGQFGGQPVGALIANYFFDPSAPDVKTMQYVASVASMSHAPFIAAAGPKFFGL ESFTGLPDLKDLKDHFEGPQFTKWQSFREQEDARYVGLTVPRFLLRNPYDPEDNPVKSFVYKENVAGSHEHYLWGNTAYAFASRLTDSFAKFRWCPNIIG PQSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFIALTMRKGSDNAAFFSANSAQKPKFFGNSEEGKTAELNYKLGTQLPYLFIVNRLAH YLKVLQREQIGAWKERTDLELELNKWIRQFVADQENPSSEVRSRRPLRAAQVNVSDVEGEPGWYRVSLSVRPHFKYMGADFTLSLVGKLDKE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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