Strain | Pseudomonas stutzeri strain SLG510A3-8, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGCAACTCGCCGATCGCTATCGCGAGCTTGCGCGCCAGGTTCATCCGGATCGCTTCGCCGATGCTGGCGAAAGCGAGCAGCGCCAGGCGCTGGAGCGTTC GGCCAATCTGAACGAGGCCTATCAGACCCTGAAGAGCCCGAGCCGGCGCGCGCGCTATCTGCTGGCGTTGGAGGGGCACGATGTGCCGTTGGAGGCGACC GTTCAGGATCCTGCCTTCTTGATGCAGCAGATGCATTGGCGCGAAGAGCTCGAAGAGCTTCACGAGCAGGCCGATCTCGATGGTGTTGCGGCTTTCAAGT CGCGGCTCAAGCAGGCTCAGCAAGGTCTCAACGACGACTTCGGTCAGATCTGGCAAGACCCCGCGCGCCGTGTGGATGCCGAAAGACTGGTTCGCCGCAT GCAGTTTCTCGACAAGTTGACCCAGGAAGTGCGCCAGCTCGAAGAGCGCCTCGACGATTAACCCGCGCGACGCTCGCGTTGCGCCCGATACCAGACAGAC
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DNA Sequence for Gene |
>AB691_RS15860
|hscA
ATGGCCTTACTTCAGATTGCCGAGCCCGGACAAAGCCCTCAGCCCCATCAGCGGCGCCTGGCTGTCGGAATAGACCTGGGCACTACCAACTCCCTCGTTG CCGCGTTGCGCAGTGGCGTCACCGCCCCGCTGGCCGATGCCGATGGGCAGGTGATTCTGCCGTCCGTTGTGCGTTATCACGCCGATCGTGTGGAGGTCGG TGCGTGTGCCAAGCGTGCAGCAGCTGCCGATCCGTTCAATACCATCAGCTCGGTCAAGCGGTTGATGGGGCGAGGGCTTGCGGACGTCAAGCAGTTGGGC GAACAGTTGCCCTATCGTTTCCGTCAGGCCGAATCGCAGATGCCCTTCATCGAGACGGTCCAGGGGGCCAAGAGCCCGGTGGAAATCTCGGCGGAGATCC TGCGGGCGCTGCGCGAGCGCGCCGAGGCGACGCTGGGTGGCGAGCTGGTCGGGGCGGTGATCACCGTGCCGGCCTACTTCGATGATGCCCAGCGTCAGGC GACCAAGGATGCGGCGCGGCTTGCCGGCCTCAATGTGCTGCGCCTGCTCAATGAGCCGACCGCAGCGGCGGTCGCCTACGGTCTGGACCGTCAGGCCGAG GGTGTCGTCGCGATCTACGATCTCGGCGGCGGAACCTTCGATATCTCCATTCTGCGTCTGACCAAGGGTGTGTTCGAGGTGCTGGCCACAGGCGGCGATA CCGCCTTGGGCGGTGACGATTTCGATCACGCCGTGGCTGACTGGATTCTCCAGCAGGCCGGGGTTTCCGAGGATCTGGCGCCCGGCGAGCAGCGCGAGCT GTTGAAGATCGCCTGCGATGCCAAGGAGCGCCTCAGCGTGGACGAGACGGTTCAGGTCGCCTATGCCGGTTGGGCGGGCGAGCTCCACCGTGAGACGTTC GATGCTCTCATCGAGCCGCTGATTGCCCGAAGCCTCAGGTCGTGCCGGCGCGCGGTGCGTGATTCCGGTGTCGAGCTGGACGAGATCACGGCAGTGGTCA TGGTCGGCGGCTCGACCCGCGTGCCAAAAGTGCGTTCGTCCGTGGGCCAGCTGTTCGGTCGGGAGCCGCTGACCGATATCGATCCGGACGAAGTGGTGGC GATCGGTGCCGCGATCCAGGCCGAGACCCTGGCGGGCAACAATCGGGACGGCGAAGAGCTGCTCCTGCTCGACGTGATCCCGCTGTCGCTGGGTCTGGAG ACCATGGGCGGGCTGATGGAGAAGATCATCCCGCGCAATACCACGATTCCGGTTGCACGTGCGCAGGACTTCACCACTTACAAGGATGGCCAGTCGGCCA TGATGATCCATGTGCTGCAAGGTGAGCGCGAGCTGATCTCCGACTGCCGTTCGCTGGCGCGCTTCGAGCTGCGTGGCATCCCGCCGATGGTTGCGGGCGC GGCGAAGATTCGCGTGACGTTCCAGGTTGATGCCGACGGACTGCTCAGCGTTTCGGCGCGCGAGTTGGCCTCCGGCGTCGAGGCCAGCATTCAGGTCAAG CCGTCCTATGGCCTGACCGATGGCGAGATCGCCAGGATGCTCGAGGACTCGTTCCGCAAGGCGGATCAGGATCGCGACGCTCGCGCTCTGCGCGAGCAGC TGGTCGATGCCCAGCGCTTGCTGGAGGCTGTCGAAGCAGCGCTGATTGCCGACGGGGAACGTCTGCTTTCCACCGAGGAGCGTGCCGCCATCGAGGCTCA GATGGCCGAGTTGCGTGCGTTGCTCGACAGTCAGGACGTGTCCGCCATCGAGCGCCAGACCAAACGCCTGAGCCAGATCACCGACGCCTTCGCTGCGCGT CGTCTGGATTCCACCGTCAAGGCCGCCTTGGCCGGGCGGCGGCTTAACGATATCGAGGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCAGATGCCGCAGATCATTTTCCTGCCTAATGCCGATCATTGCCCCGAAGGTGCCGTGATCGAGGCGAAAACCGGCGAGACGGTGCTGGACGCCGCGTT GCGCAACGGCATCGATATCGAGCATGCCTGCGAGAAGTCCTGCGCATGCACCACCTGTCACGTGGTGGTTCGCGAGGGCTTCCAGTCGCTTGAGGCCTCC GATGAGTTGGAGGACGACATGCTCGACAAGGCCTGGGGGCTGGAGCCCAACTCGCGGCTGTCCTGTCAGGCGGTAGTGGCCGATACAGATCTCGTCGTGG AGATTCCGAAGTACACCATCAACCAGGTGTCGGAAGGGCATTGAGGGCAAGGACATGCAACTGAAATGGACTGATGTGCAGGACATCGCCATCGAACTCG CCGAGCGCAAGGCCGATGTCGATCCGCGCTATGTGAATTTCGTCGATCTGCATCGCTGGGTACTCGAGCTGCCTGACTTCGCTGACGAGCCTAGTCGTGG
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Amino Acid Sequence |
>chaperone protein HscA
MALLQIAEPGQSPQPHQRRLAVGIDLGTTNSLVAALRSGVTAPLADADGQVILPSVVRYHADRVEVGACAKRAAAADPFNTISSVKRLMGRGLADVKQLG EQLPYRFRQAESQMPFIETVQGAKSPVEISAEILRALRERAEATLGGELVGAVITVPAYFDDAQRQATKDAARLAGLNVLRLLNEPTAAAVAYGLDRQAE GVVAIYDLGGGTFDISILRLTKGVFEVLATGGDTALGGDDFDHAVADWILQQAGVSEDLAPGEQRELLKIACDAKERLSVDETVQVAYAGWAGELHRETF DALIEPLIARSLRSCRRAVRDSGVELDEITAVVMVGGSTRVPKVRSSVGQLFGREPLTDIDPDEVVAIGAAIQAETLAGNNRDGEELLLLDVIPLSLGLE TMGGLMEKIIPRNTTIPVARAQDFTTYKDGQSAMMIHVLQGERELISDCRSLARFELRGIPPMVAGAAKIRVTFQVDADGLLSVSARELASGVEASIQVK PSYGLTDGEIARMLEDSFRKADQDRDARALREQLVDAQRLLEAVEAALIADGERLLSTEERAAIEAQMAELRALLDSQDVSAIERQTKRLSQITDAFAAR RLDSTVKAALAGRRLNDIED
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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