Strain | Pseudomonas stutzeri strain SLG510A3-8, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CAAGCAGCACCTGCGAAGCCTCCCCGCCGAGCGCTGGCCGGACAGCGAGACACTGGCGCAGGCACTGTGCATGTCGGCCTCGACGCTGCGTCGCCGTCTG GCAGAAGCGGGGCAGCCTTACCAGGCCATCAAGGACGGCCTGCGTCAGGAAATGGCCACCGAGTGGCTGGCCGACGCCAGCGTCAGCTATGGCGAGATTG CCGAGCGACTGGGGTTTGCCGATGTCAGCTCGTTCTACAAGGCCTTTCGCAAGTGGACGGGTATCAATCCGGGCCACTACCGCAACCTCATTCTCGCGCC GGCTCGAGGCTGAGCGCGAAGCTGCTGGGCTCCATCCCCCCGCAGCTTTGCCCACGCTCTATGGGCAGACCTGTAATCGCTTTTTGCCATTGGCCAAAAC GGTCAGGCAGGTTGAATAGATCGACCATTGCCGCCCGCCCGTCGCTGTCCAAAGATGATCCCGGCTTCGAACCCCATAACAACAAGCACGGGAGAACGCC
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DNA Sequence for Gene |
>AB691_RS12160
ATGCGGATTCAGGACAACGTATTCCTTATCACCGGCGGCGCGTCCGGCCTCGGCGCCGCAGCGGCGCAGGCGCTGGTCGAGGCGGGCGGCAAGGTGGTTC TGGTCGACCTCGACGAAACGGCCGCACAGGCCACTGCCCACGCACTGGGCGCGAATGCGTTCAGTGTGGTCGCCGACATCCGCGACGAGACGGCCGCCCG CCATGCCGTCAGCGCTGCTCGCGAACGCTTCGGTGCGCTGCACGGATTGGTCAACTGCGCCGGCGTCGCCGGCGGCGAAAAGGTCCTCGGCCGCAACGGG CCGCACAGTCTGGACAGCTTCAGCCGCATCGTCGGCATCAACCTGATCGGCAGCTTCAACATGCTGCGCCTGGCCGCCGAGGCGATGGCCGAGAACGCGC CGGACGAAGGCGGCGAGCGCGGCGCGATCATCAATACGGCCTCGATCGCCGCCTTCGACGGCCAGATCGGCCAGACCGCCTATGCCGCGTCCAAGGGCGG CGTGGTCAGCCTGACATTGCCGGCCGCCCGCGAGCTGGCGCGCTTCGGCATCCGGGTGATGACCATCGCCCCCGGCGTATTCGAGACGCCGATGATGGCC GGCATGACCCAGGAAATCCGCGACTCGCTGGCTGCCGGCGTGCCGTTCCCGCCACGTCTGGGGCATCCGGCCGAATACGCCGCGCTGGTGCGGCACATCT TCGAGAACAGCATGCTCAACGGCGAGGTGATCCGCCTCGACGGTGCCTTGCGCATGGCCGCCAAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGGAAGCAGAGATGAAAGATGATCCGATCGTAATCGTCAGCAGCGCACGCACGCCCATGGGCGGCTTTCAGGGCGACCTGCAGGGCATGACCGCCTGGCA ACTCGGCGCTGCCGCCATCCGCGCCACGGTGGAACGCAGCGGGCTGCCGGCCGAGAACGTGCAGGACGTGCTGATGGGCTGTGTGCTACCTGCCGGCCAG GGGCAGGCACCGGCACGGCAGGCGGCATTGAGCGCCGGACTGACCCGCGCCACTACCTGCACCACCGTGAACAAGATGTGCGGCTCGGGCATGCAGACGG TGATCATGGCCCACGATCAGCTGCTCGCCGGCAGCGCCGATATCGTTGTCGCTGGCGGCATGGAAAGCATGAGCAACGCACCGTACCTGCTCGACCGCGC CCGCGGCGGCTACCGCATGGGCCACGGCCGGGTACTCGACCACATGTTCCTCGATGGCCTGGAAGATTCGTTCGACAAAGGCCGGCTGATGGGCACTTTC
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Amino Acid Sequence |
>3-hydroxy-2-methylbutyryl-CoA dehydrogenase
MRIQDNVFLITGGASGLGAAAAQALVEAGGKVVLVDLDETAAQATAHALGANAFSVVADIRDETAARHAVSAARERFGALHGLVNCAGVAGGEKVLGRNG PHSLDSFSRIVGINLIGSFNMLRLAAEAMAENAPDEGGERGAIINTASIAAFDGQIGQTAYAASKGGVVSLTLPAARELARFGIRVMTIAPGVFETPMMA GMTQEIRDSLAAGVPFPPRLGHPAEYAALVRHIFENSMLNGEVIRLDGALRMAAK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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